Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1243 |
Symbol | |
ID | 5199204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1398091 |
End bp | 1399494 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640580790 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_001261746 |
Protein GI | 148554164 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.317364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTTCAAAG GTCTGCGGCC GATCCAATAT GGTGGACGGG AAGTCTGGCC CATCATCGAG GGTGGTAAGG GTGTCGCCGC GACCAACCAT GCCAGTTCGG GCGCCTGGGC GGCGGCCGGC GGCATCGGCA CCGTTTCGGC GGTCAACGCC GACAGCTACG ATCCCGACGG CAAGATCATC CCGCAGGTCT ATCGCGCGCT CACCCGCCGC GACCGTCACG AGGAACTGAT CGCCTACGCG ATCGACGGCG CGGTCGAGCA GGTCAAGCGC GCCTTCGACA TTTCCGGCGG CAAGGGCGCG ATCAACATCA ACGTGCTGTG GGAGATGGGC GGCGCGCAGC GCGTCCTCCA CGGCGTGCTC GAACGCACCA AGGGCATGGT GACCGGCGTC ACCTGCGGCG CGGGCATGCC CTACAAGCTC AGCGAGATCG CCGCCTCCTA CGGCGTCAAC TATCTGCCGA TCGTCTCCTC GGCGCGCGCC TTCAGCGCGC TGTGGAAGCG CGCCTATTCG AAGGCCGCCG AATGGCTGGC GGCGGTGGTC TATGAGGACC CCTGGCTCGC GGGCGGCCAT AACGGCCTGT CGAACGCCGA GGACCCGAAG GCGCCGCAGG ACCCCTATCC GCGCGTCAAG GCGCTGCGCG AGACGATGCG CCAGGGCGGC ATCTCCGACG ACGTGCCGAT CGTGATGGCG GGCGGCGTCT GGTATCTGCG CGACTGGAAC GACTGGATCG ACAATCCCGA ACTCGGCCAG ATCGCCTTCC AGTTCGGCAC CCGCCCGCTG CTGACGCGGG AAAGCCCGAT CCCGCAGGAA TGGAAGGACA AGCTCACCGT CCTCGAGCCC GGCGACGTGC TGCTGCACCG CTTCTCGCCG ACCGGCTTCT ATTCCTCGGC GGTCCGCAAC GACTTCCTCC GCAGCCTCGA GGCGCGGTCG GAACGGCAGA TCGCCTTCTC GATGGAAGCG GCCGGCGACC ATCAGTACCA GCTCGACGTC GGCGTGAAGG GCAAGAGCTT CTGGGTCACG CTCGGCGACC TGCACCGCGC CCGCGAATGG CACGGCCTCG GCTTCACCAA CGCGCTCAAG ACGCCCGACA ACACGCTCGT CTTCGTCACC ACCGACGAGA TGAAGGTGAT CCGCAAGGAC CAGGCCGACT GCATGGGCTG CCTCAGCCAG TGCGCCTTCT CCTCCTGGGC GGACAATGAG AACAACTCGA CCGGCCGCCT CGCCGACCCG CGCAGCTTCT GCATCCAGAA GACGCTGCAG GACATCGTCC ATGGCGGCCC CGTCGACCAC AACCTGATGT TCGCGGGCCA CGCCGCCTTC AAGTTCCGGC AGGACCCCTT CTACTCGAAC GGCTTCGTGC CGACGGTGAA GCAGCTCGTC GACCGCATCC TGACCGGCGA CTGA
|
Protein sequence | MFKGLRPIQY GGREVWPIIE GGKGVAATNH ASSGAWAAAG GIGTVSAVNA DSYDPDGKII PQVYRALTRR DRHEELIAYA IDGAVEQVKR AFDISGGKGA ININVLWEMG GAQRVLHGVL ERTKGMVTGV TCGAGMPYKL SEIAASYGVN YLPIVSSARA FSALWKRAYS KAAEWLAAVV YEDPWLAGGH NGLSNAEDPK APQDPYPRVK ALRETMRQGG ISDDVPIVMA GGVWYLRDWN DWIDNPELGQ IAFQFGTRPL LTRESPIPQE WKDKLTVLEP GDVLLHRFSP TGFYSSAVRN DFLRSLEARS ERQIAFSMEA AGDHQYQLDV GVKGKSFWVT LGDLHRAREW HGLGFTNALK TPDNTLVFVT TDEMKVIRKD QADCMGCLSQ CAFSSWADNE NNSTGRLADP RSFCIQKTLQ DIVHGGPVDH NLMFAGHAAF KFRQDPFYSN GFVPTVKQLV DRILTGD
|
| |