| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1180 |
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| Symbol | |
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| ID | 5198030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1342756 |
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| End bp | 1343736 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640580727 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001261684 |
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| Protein GI | 148554102 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGTT GGGACGGGCT GGAGGAGATC GTCGCGATCG CCGATACGGG CAGCTTCGTC
GGCGCGGCGC GGCGGCTGCG GGTGTCGGCG TCGCAGATCA GCCGCGCGGT GCAGCGGCTG
GAGCATCGGC TGCGCGCCGA GCTGTTCATC CGCACCACCC GTTCGGTCCA GCTCACCGAG
GCGGGGCGCA CGCTGGTCGA GCAGTGCCGC CGCATCATCG ACGAACGCGA CGAGGCGCTC
CAGCTCGCGC GCGGCCAGGG CGAGATGCAG GGCGAGGTGC GGCTGACCTG CTCGACCGCG
CTGGGCGAGC GCTTCGTCGC GCCGATCGTG CGCCGCTTCA TCGAGACCCA TCCGCGCCTC
TCGGTCCGGC TGGAGCTCAC CAACCGGCTC GTCGACCTGG TCAGCGAGGG GTTCGACGTG
GCGATCCGCA CCGGCCATCC GACCGACCAT CGCCTCGCCG CGCGGCAGAT CGCCTCGCGC
CCGGCCGAGG TCTGCGCCTC GCCCGCCTAT CTCGCCCGCG CCGGCCACCC GCGCGGCCTC
GCCGATCTCG ACCGGCACGA ATGCCTGATC GGGACGAGCG TGAACTGGCA TTTCCTGGAG
GACGGGCAGC GGCGCAGCTT CGTGCCCAGC GGCCGCTGGC GCTGCAACAG CGGCAATGCG
GTGGTCGACG CGGCGCTGGC GGGGATGGGC ATCTGCCAGC TCCCCAGCTT CTACGTCCGC
GACCATATCG CCGCCGGGCG GCTGGTGGCG CTGCTGGAGG ACTATCGCGA CCGGCCCGAG
CCGGTCTGGG CGGTCTATCC GCAGCGCCGC GCGCTGCTGC CCAAGATCCA GCAGGTCATC
GCCGCGCTGG AGGCGGAGCT GGACGAGGCG ATGAACGCGC CCTCGCCCCG TTCCGTCATG
CCGGCGGAGG CCGGCATCTC GGCGGGCTCC TGCGACGACG TTGCCGCGAC TCTCCCGAGA
TCCCGGCCTC CGCCGGGATG A
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| Protein sequence | MAGWDGLEEI VAIADTGSFV GAARRLRVSA SQISRAVQRL EHRLRAELFI RTTRSVQLTE
AGRTLVEQCR RIIDERDEAL QLARGQGEMQ GEVRLTCSTA LGERFVAPIV RRFIETHPRL
SVRLELTNRL VDLVSEGFDV AIRTGHPTDH RLAARQIASR PAEVCASPAY LARAGHPRGL
ADLDRHECLI GTSVNWHFLE DGQRRSFVPS GRWRCNSGNA VVDAALAGMG ICQLPSFYVR
DHIAAGRLVA LLEDYRDRPE PVWAVYPQRR ALLPKIQQVI AALEAELDEA MNAPSPRSVM
PAEAGISAGS CDDVAATLPR SRPPPG
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