Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1157 |
Symbol | |
ID | 5198157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1309376 |
End bp | 1310230 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580704 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_001261661 |
Protein GI | 148554079 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.604603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.183465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAGA CCCATATCCT CACCCTGTCC TGCGTCGATC ATCCGGGGAT CGTCGCCGCC GTGTCGACCT CGCTGGCGCG GCACGGCGCC AACATCCTGG AGGCGCAGCA GTTCGACGAC CTGCTGACCG GCCGCTTCTT CATGCGGGTC GAATTCGCGC TGGTCGGCGG CGCCACGATC GGGCAGCTCG CGGCGGGCTT CGCGCCGGTC GCCGCCGATC ACGGCCTCGA CCATCGCTTT CGCGCCTCGG CCGAGCGCAA GAAGGTGCTG CTGCTCGCCA GCAAGTTCGA CCATTGCCTC GCCGACCTGC TCTACCGCTG GAAGATCGGC GAGCTGGCGA TGGAGCCGGT CGGCATCGCC TCGAACCATC CGCGCGAAAC CTATGCGCAT CTCGACTTCG GCGACATCCC CTTCCATTTC CTGCCGGTCG GCCGCGACAG CAAGGCCGCG CAGGAGGCGA GCATCAAGGC GATCGTCGAG GAGACCGGCG CCGAGTTGGT CGTGCTCGCG CGCTACATGC AGATATTGTC GGACGACCTT GCCGCCTTCC TGGCCGGGCG CTGCATCAAC ATCCACCACA GCTTCCTGCC CGGCTTCAAG GGCGCCAAGC CCTATCACCA GGCGCATGCG CGCGGGGTCA AGCTGATCGG CGCGACCGCC CATTTCGTGA CGGCCGACCT CGACGAGGGG CCGATCATCG AACAGGACAC CGAACGGGTC AGCCATCGCG ACACGCCCGA CGACCTCGTC CGCAAGGGCC GCGACATCGA GCGCCGCGTC CTCGCCAGCG CGGTCCGCGC GGTCCTTGAG GACCGCGTCC TGATGAACGG CGCGACGACG GTGGTGTTCA GCTAG
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Protein sequence | MAETHILTLS CVDHPGIVAA VSTSLARHGA NILEAQQFDD LLTGRFFMRV EFALVGGATI GQLAAGFAPV AADHGLDHRF RASAERKKVL LLASKFDHCL ADLLYRWKIG ELAMEPVGIA SNHPRETYAH LDFGDIPFHF LPVGRDSKAA QEASIKAIVE ETGAELVVLA RYMQILSDDL AAFLAGRCIN IHHSFLPGFK GAKPYHQAHA RGVKLIGATA HFVTADLDEG PIIEQDTERV SHRDTPDDLV RKGRDIERRV LASAVRAVLE DRVLMNGATT VVFS
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