Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1112 |
Symbol | |
ID | 5198709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1250133 |
End bp | 1252103 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580659 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001261616 |
Protein GI | 148554034 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.245577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.568355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTCA GATGGATCGC GGCCGCGCTG GCGCTGGCCG CTACGGGCGC ATCGGCGCAG ACCGATCTCG CGACTGCCTT CGGCGCGCGC GAGCAGATCG AGCAGATCAG CCTGTCGCCC GACGGATCGC GGCTGGCCTA TGTCGTCCCG ACCGCAGGGC AGGGCTCGGC GCTGCTGACT TTCGCGCCCG GGGTCGACAA GGAGCCCAAG GTCGCCTTCG CCATGAACGG CGAGCCCGAT CGCCTGTCGG ACTGCAACTG GATCGCCAAC GACCGGCTGG TGTGCGGGAT ATGGGGCCTC GCCCAGCCCG CCGAGTTGGC CAATGCGGGT ATCATCCCCT ATTCGCGGGT CGTCGCGATC GACGCCAATG GCGGCAATCC GCGCATGCTC AGCGCGATGC ACAACAGCAA TTCGCGCGGC TACAACCTGC GCGGCGGCGA GGTGATCGAC TGGCTGCCGG AGGAGGACGG CAACGTCCTG ATGACCCGCA ACCAGCTTCC CGACTCCCGC CTGGGCACGC GCCTGGGCAA GAGCGAGGAA GGCATGACGG TGGACAAGGT CGACACGCGC ACGCTCAGCT CGTCGCGCGT CGAAAGCGCC CAGCAGGATG TCTCCACCTA TATCAGCGAC GGCCACGGCA CGCTGCGGAT CAAGGCGATC CAGCAGAATG AGGGTGGCCG CGACAGCGGC GTGATCCGCT ATTATTACCG GCAGGCGGGC AGCAAGAAAT GGGAGCCGCT GTCCGATTAC AACTATGTCA CCGAGGATGG GTTCGAGCCG GACTCGGTCG ATTATGAGCG CAACGCCGTC TATGGCTTCC GCAAGAAGAA CGGCCTCAAG GCCGTCTATC GCATCGCGCT CGACGGATCG CTCAAGGAGG AGCTGGTCTA TTCGCGGCTC GATGTCGACG TCGATAAGCT GATCCATATC GGCCGGCGCA ACCGCGTGAT CGGCGCCAGC TATGCCACCG ATATCCGCCA GGCGGTCTAT TTCGACGCCG ACCTCGCCAA GCTCAGGGAC TCGCTGGCCA AGGCGCTGCC GGGGCAGCCG ATGGTCCGCA TCGTCGATTC GAGCATGGAC GAGAAGAAGC TGCTGATCTG GGCGGGCAGC GACAAGGATC CGGGCGTCTA TTATATCCTC GACCGGACGA CCAAGCAGAT GGCGACCTTC CAGCCGAACC GGCCGCAGCT CGAAGGCGTC CAGCTCGCCG AGATGAAGCC GGTGTCCTAT CCGGCCGCCG ACGGCACCAT GATCCCCGGC TATCTGACCT TGCCGGCCGG CAGCGCGGGC AAGAACCTCC CCGCGATCGT CATGCCGCAT GGCGGCCCCG GCGCGCGCGA CACATGGGGT TTCGATTGGC TGGCGCAATA TTATGCGGCG CGCGGCTTCG CCGTGCTGCA GCCCAATTTC CGCGGATCGA CCGGCTATGG CGATGACTGG TATCTGCAGA ACGGCTTCAA GTCCTGGCCG ACGGCGGTCT CCGACATCGG CGACGGGGCG CGCTGGATGA TCAAGCAGGG GATCGCCGAT CCCAGCAAGC TCGCGGCGGT CGGCTGGTCC TATGGCGGCT ATGCGGCGCT CCAGTCGGCG GTGGTCGACC CCGCCTTGTT CAAGGCGATC GTCGCGATCG CCCCGGTGAC CGACCTGCCG CTGCTCAAGG AGCAGTCGCG CTGGTGGAGC GATTATCGCC TCGTCAGCGA CTTCATCGGA TCGGGACCGC AGGTGCTGCA GGGATCGCCC GCGCGCAACG CGGCGCAGAT CAAGGCCCCG GTGATGCTGT TCCACGGCAC GATGGACCGC AACGTCAATG TCGAGCAGAC GCGGGTGATG GACCGGGCGC TGGCCGCGGC CGGCGTCCCG CACAAGACGG TGATCTTCGA GAACCGCGAC CACCAGATCG AGGACGGCGC GATGCGCGCA CGGATGCTCC GCGACAGCGA TGCCTTCCTG CGCCAGTCGA TGGGGATGTG A
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Protein sequence | MTVRWIAAAL ALAATGASAQ TDLATAFGAR EQIEQISLSP DGSRLAYVVP TAGQGSALLT FAPGVDKEPK VAFAMNGEPD RLSDCNWIAN DRLVCGIWGL AQPAELANAG IIPYSRVVAI DANGGNPRML SAMHNSNSRG YNLRGGEVID WLPEEDGNVL MTRNQLPDSR LGTRLGKSEE GMTVDKVDTR TLSSSRVESA QQDVSTYISD GHGTLRIKAI QQNEGGRDSG VIRYYYRQAG SKKWEPLSDY NYVTEDGFEP DSVDYERNAV YGFRKKNGLK AVYRIALDGS LKEELVYSRL DVDVDKLIHI GRRNRVIGAS YATDIRQAVY FDADLAKLRD SLAKALPGQP MVRIVDSSMD EKKLLIWAGS DKDPGVYYIL DRTTKQMATF QPNRPQLEGV QLAEMKPVSY PAADGTMIPG YLTLPAGSAG KNLPAIVMPH GGPGARDTWG FDWLAQYYAA RGFAVLQPNF RGSTGYGDDW YLQNGFKSWP TAVSDIGDGA RWMIKQGIAD PSKLAAVGWS YGGYAALQSA VVDPALFKAI VAIAPVTDLP LLKEQSRWWS DYRLVSDFIG SGPQVLQGSP ARNAAQIKAP VMLFHGTMDR NVNVEQTRVM DRALAAAGVP HKTVIFENRD HQIEDGAMRA RMLRDSDAFL RQSMGM
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