| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1070 |
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| Symbol | |
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| ID | 5199725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1195483 |
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| End bp | 1196676 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580615 |
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| Product | 4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase |
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| Protein accession | YP_001261574 |
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| Protein GI | 148553992 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase
[TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0857204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCA CCCTGCGCGG CGACGTGCGC CTGCATTGGC GGCTGGACGG CTCGGATGAG
CGTCCGCCGC TCGTCCTGCT CAATTCGATC GGTACTGATA TCTCGCTGTG GGACCGGACG
GTTCCACACT TGCTGCCCAC CTTCCGATTG CTGCGTATCG ATGTGCGCGG CCATGGCGCC
TCAGACGCCC CGGCGGGCGA CTATGACCTG GCCATGCTGG CCGACGACGT CGCCGCCGTC
ATGGACGATG CCGGTATCGC CGTCGCCCCG GTCGCGGGCG TTTCGCTCGG CGGCATGATC
GCGATGGAAA TTGCCTTGCG GCACCCCGAC AAGGTTGCGG CGCTTGCCCT GATCTGTACG
TCCGGCGCGA TGGACCCTGC AGCATGGGCT GCGCGGGTCG ACGCGGTCCG TGACGGCGGC
ACGGGCGCCA TCGCGGACAT GGCGATCGAA CGCTTCCTGT CGTCCGATTT CATCGTGCGG
CATCCTGAGA TCGCCGAGAG CTTGAAACGC GCGATCCGTG CGCAGGCCGA CGATGGATAT
GTCGGGGCCG CCGCCGCGAT CCGCGACATG GCGCTCGCCG ATCGGATCGG CGCGATCGCT
GTTCCCACGC TGGTCGTGAC GGGGGCCGTC GATATCTCGA CGCCCTACGA AGGTCATGGC
GATCGGCTCG TGCACTCGAT TCCGGGCGCC GTCCGTGCCG TGGTGGCCGG CGCACACCTC
CCGCCCATCG AAGCGCCAGG GCAGCTTGCG GCACGGATAC AATCTTTCCT GCTGGGCGAC
GCGGCGATTG TCGAGGCTGC CGACACGCTG TTCGAAGCCG GGCTTGTCCA CCGGCGTCGG
GTGTTGGGCG ACGATTGGGT CGACCGCTCC CTGACCAAGC GGACCGCATT CAACGCCGAT
TTCCAGGCTT TGATCACGCG CATCGCCTGG GGCGAGATCT GGAGCCGGCC GGGGCTCGAC
GATCGCACGC GCCGCCTGCT CGTCGTGGCG ATCACCGCCA GTCTCGGGTG CTGGGAGGAA
TTTGCCCTTC ATGTGCGGGC GGGCCTTGGT CAGAGCGGGT TCACGCGCGA CGAACTGAAG
GAGGTCCTGA TGCAGACCGC CATCTATGCG GGCGTGCCGG CGGCCAATAC CGCTTTCGCC
GAGGCGCAGA GGATTATCGC GGAGCTCGAC GGGGATGCGG GCTATCGTCG GTGA
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| Protein sequence | MAFTLRGDVR LHWRLDGSDE RPPLVLLNSI GTDISLWDRT VPHLLPTFRL LRIDVRGHGA
SDAPAGDYDL AMLADDVAAV MDDAGIAVAP VAGVSLGGMI AMEIALRHPD KVAALALICT
SGAMDPAAWA ARVDAVRDGG TGAIADMAIE RFLSSDFIVR HPEIAESLKR AIRAQADDGY
VGAAAAIRDM ALADRIGAIA VPTLVVTGAV DISTPYEGHG DRLVHSIPGA VRAVVAGAHL
PPIEAPGQLA ARIQSFLLGD AAIVEAADTL FEAGLVHRRR VLGDDWVDRS LTKRTAFNAD
FQALITRIAW GEIWSRPGLD DRTRRLLVVA ITASLGCWEE FALHVRAGLG QSGFTRDELK
EVLMQTAIYA GVPAANTAFA EAQRIIAELD GDAGYRR
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