Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1044 |
Symbol | |
ID | 5197209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1161847 |
End bp | 1163844 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580589 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001261548 |
Protein GI | 148553966 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0849595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCATTCG ACCGCATCCT GAGCCCGATC CTGATCAACG GGCTCGAGAT CAGGAACCGC GTCGCCCGCG CCGCGCACGG CACCAGCTAT GGCCGCGGCG CGATCAGCGA CGACCTGATC GCCTATCATG AGGCGCGCGC GAAGGGCGGG GTCGGGCTGA ACATCCTCGA GGCGACGGTG GTCCATCCGT CGACCTCGAA CCACACCGTC AACGCGCTCG ACGATTCGAT CATCCCCGGT TTCGCGAAGC TGGGGGAGGC CTGTTCGCGG CACGGGATGC GGACCTTCGT CCAGCTCTGG CACGGCGGCC ATCGCTGGGC CCCCGCCAAC GGCCAGGCGC CGCTGTCGGC CTCCGACGTG CCCTGCCCGC TCGGCGTCAC CAACACGCCG CAGCCGATGA CGCTCGACCA GATCGAGGAG ATCACCGAGG CCTTCGCCGA CGCCGCCGAG CGGGTCCGCA AGGGCGGGCT CGACGGGATC GAGCTGCATT GCGGCCACGG CTATCTGGTC CACCAGTTCC TCTGTCCGCT GACCAATCGC CGCGAGGACG ATCATGGCGG CAGCCTGGAG AACCGGATGC GCTTCATGCA CGGCATCCTC GGCGCGATCC GCAAGCGGGT GGGCGACGAC TTCCCGCTCG GCATCCGCAT CTCCGACTAC AACGCCCCCG GCGGCTTCAG CCCCGAGGAG GCCGGCGAGG TCGTCGCGCG GGTCTGCGCC GACGGGCTGG TCGACTATGT CAGCGGGTCG ATGGGCAGCC CCTACAGCAT CGCGTCGATG CTCGGCTGCA TGGACCAGCC GTCGGGCTAT ATGCTCCCCT CCGCCGAGCC GATCGTCCAG CGCGCGACCG TGCCGACGAT GATCGCGGGC CGCTTCGGCA CGCTCGACGA GGGCGAGCAG GTGATCCGCG CCGGCCTGGC CGACATGGTC AGCTATGTCC GCGCGCTGAT CGCCGACGCC GATCTGGTCG CCAAGTCGGC GGCCGGCAAC GCGATCGGCG TCCGCCCCTG CATCGGCTGC AACCAGGGCT GCGTCGGCGG CATCCGCACC CCCGTCCAGC GGATGACCTG CACGGTCAAT CCGGCGGTCG GCTTCGAGCG GACGATGGAC GAAAGCCTGA TCGCCCCCGC CGAAACCCCG CGCAAGGTGG TGGTGATCGG CGGCGGCCCG GCCGGCATGG AGGCGGCGCG GATCGCCCGG CTGCACGGCC ATGAGGTGGT GCTGATGGAG GCGCAGCCGA CCCTCGGCGG CGCGGTCAAC ATCGCCAGGC ATGCGCCGAA GCTCCAGGCG ATCCACGACA TCACCCTGTG GCAGGAAGCG GAGGTGTTCC GCCTCGGCGT CGACGTGCGC CTGTCGACCT ATGCCGAGGT CGACGAGGTG CTGGCCGAGC GGCCCGACGT GGTGATCATC GCCACCGGAT CGCTGCCGCG CATGGACGGT CTTCAGGCGC AACGGCCCGA GCGGCCGATT CCCGGCTTCC ACCAGCCGCA CGTGCTGTCG TCCTGGGACC TGCTGCTCGG CCCGGCCGGC GGCCACGGCC GGAGCGCGGT CGTGTTCGAC GATATCGGCC ATTATGAGGG GATCGCCGCG GCCGAGCATC TGATCGCGCA GGGCGTCGCC GTCACCTATG TCGCGCGCCA TTCGAGCTTC TCGCCGACGA TGGACATCAT CCTGCGCACC GGCCCGGCGC TGCGCCGCCT GCGCAAGGGC AGGTTCGACC TGGTGGTGTC GGGGCGGATC GTCGCGATCG GCCAGGATCG CTGCACGATC GGCTATCTCG ACGGCGACGA GGAGTGGGAG GTTCCCGCCG ACACCGTCAT ATTCGTCGGC TACAACCAGG CGCAGGCCGA CCTGTGGCGC GCGCTGGGCG GCGGATCGCG GGCGCCCAAG CCGTATCAAC TGCATCTGAT CGGCGACGCC AATGCGCCGA GGGACCTGCT GATGGCGATC CGCGAGGGCA ATATGGCGGG GCGTATCGAG GAGAATGCGG ATGCTTGA
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Protein sequence | MSFDRILSPI LINGLEIRNR VARAAHGTSY GRGAISDDLI AYHEARAKGG VGLNILEATV VHPSTSNHTV NALDDSIIPG FAKLGEACSR HGMRTFVQLW HGGHRWAPAN GQAPLSASDV PCPLGVTNTP QPMTLDQIEE ITEAFADAAE RVRKGGLDGI ELHCGHGYLV HQFLCPLTNR REDDHGGSLE NRMRFMHGIL GAIRKRVGDD FPLGIRISDY NAPGGFSPEE AGEVVARVCA DGLVDYVSGS MGSPYSIASM LGCMDQPSGY MLPSAEPIVQ RATVPTMIAG RFGTLDEGEQ VIRAGLADMV SYVRALIADA DLVAKSAAGN AIGVRPCIGC NQGCVGGIRT PVQRMTCTVN PAVGFERTMD ESLIAPAETP RKVVVIGGGP AGMEAARIAR LHGHEVVLME AQPTLGGAVN IARHAPKLQA IHDITLWQEA EVFRLGVDVR LSTYAEVDEV LAERPDVVII ATGSLPRMDG LQAQRPERPI PGFHQPHVLS SWDLLLGPAG GHGRSAVVFD DIGHYEGIAA AEHLIAQGVA VTYVARHSSF SPTMDIILRT GPALRRLRKG RFDLVVSGRI VAIGQDRCTI GYLDGDEEWE VPADTVIFVG YNQAQADLWR ALGGGSRAPK PYQLHLIGDA NAPRDLLMAI REGNMAGRIE ENADA
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