Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0996 |
Symbol | |
ID | 5200023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1107907 |
End bp | 1108656 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640580542 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001261501 |
Protein GI | 148553919 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.201274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.275669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGATC TGACGGGCGA GGTGGCGCTG GTCACCGGCG CGACGGCGGG GCTCGGGCTG CGCTTCGCCC GGACGCTGGC GGCGGCCGGG GCGAGCGTCG CCGTCGCGGC GCGGCGCGGC GACCGGCTCG ACGCGCTGGT CGCCGAGATC GAGGGGGCAG GCGGCCGCGC GCTGGCGATT CCGGCCGACC TGACCGACGC CGCCACGCTG GAAGGGGTGG TGGACGCCGC CCAGGCGAAG CTCGGCCTCG TCACCATCCT GGTCAACAAT GCCGGCATCC CCGACGCGGA GCTCGCGACG CGGATGTCGC TGGAGCTGAT CGACCGGGTG ATCGCGCTCA ACCTCCGCAC CCCCTTCGTC CTGTCGCGCG AGGTGGCGAA GCGGCTGATC GCGGCGAAGC GGCCCGGTCG CATCGTCAAC ATCGCCTCGA TGGCGGCCTT CCACAGCGCG CGGGCGGGAT CGTCGCTCTA TGCGACGACC AAGAGCGCGG TGGTGCGGAT GACCGAGGCG CTGGCGGTCG AATGGGCGGC CTATCCGATC AACGTCAATG CGATCGCCCC CGGCGCCTTC CGGTCGGAGA TGATGGAGGG GATGATCGAG CGGGTCGGCG ACATGTCGCA GGGCTTTCCG CGCAAGCGGC TGGGCGACCC CGCCGACCTC GACGGCACCT TGCTGTTCCT CGCCTCGCAG GCCTCGGCGC ATGTGACGGG CACCTGCATC AAGGTCGACG ACGGCCAATA TCCGCGATAG
|
Protein sequence | MADLTGEVAL VTGATAGLGL RFARTLAAAG ASVAVAARRG DRLDALVAEI EGAGGRALAI PADLTDAATL EGVVDAAQAK LGLVTILVNN AGIPDAELAT RMSLELIDRV IALNLRTPFV LSREVAKRLI AAKRPGRIVN IASMAAFHSA RAGSSLYATT KSAVVRMTEA LAVEWAAYPI NVNAIAPGAF RSEMMEGMIE RVGDMSQGFP RKRLGDPADL DGTLLFLASQ ASAHVTGTCI KVDDGQYPR
|
| |