Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0991 |
Symbol | |
ID | 5199736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1102525 |
End bp | 1104018 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640580537 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_001261496 |
Protein GI | 148553914 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0782856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.327269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTGA GGATGCCGAC ACCGGACGAG GCCGTGCTTG CCCGCCGCGC GGAGATCGTC GCGGCGCTGC GGGCGATCGT GCCCGGCGAA GGCGTGATCG ACGATGCCGA CGAGCTTCGC CCCTATGAGA GCGACGGGCT GACCGCCTAT CGCCAGCCGC CGATGGTCGT CGTCCTGCCC GAGACGGTCG ATCAGGTCGC GGCGGTGCTG CGCTGGTGCC ATGCCAACGG CGTCCGCGTC GTGCCGCGCG GCGCGGGCAC GTCGCTCTCG GGCGGGGCGC TGCCGCTGGC CGACGCGGTG CTGCTCGGCA TGGCGCGCTT CAACCGCATC CTCGCCATCG ACTATGCCGA CCGCATCGCG GTGGTCCAGC CCGGCGTCAC CAACCTCGCC ATCACCCGCG CGGTCGAGGA GGAGGGCTTC TACTACGCCC CCGACCCGTC GAGCCAGATC GCCTGCACGA TCGGCGGCAA CGTCGCCGAG AATTCGGGCG GGGTGCATTG CCTGAAATAT GGGCTGACCA CCAACAACGT CCTCGGCGTC GAGCTGGTGA CGATCGAGGG CGAGGTGCTG CGCCTCGGCG GCCGCCACCT CGACCCGGCC GGGCTCGACC TGCTCGGCGT CGTCGTCGGG TCGGAAGGGC TGCTCGGCGT CGTCACCGAG GTGACCGTCC GCATCCTGCC CCGGCCCGAG ACCGCGCGCG CCGCGCTGAT CGGCTTCCCG ACCGTAGAGA GCGCCGGCCA GTGCGTCGCC GACGTCATCG CCGCCGGCAT CATCCCGGCG GGGATGGAGA TGATGGACCG CCCCGCCATC CACGCCGCCG AGGCGTTCGT GCAGGTCGGC TATCCGCTCG ACGTCGAGGC GCTGCTGATC GTCGAGATGG ACGGCCCCGC CGCCGAATGC GACCATCTGG TCGACGAGGT GGCGCGGATC GCCGACGCCA ACGGCGCGGT GTCGCTGCGC GTCTCCAACG ACGATGCCGA GCGGCTGGCC TTCTGGGCGG GGCGCAAGGC CGCCTTCCCC GCCGTCGGCC GGATCGCGCC CGATTATTAT TGCATGGACG GCACCATCCC GCGCCGCCGC CTGCCCGAGG TGCTGCGCCG CATGTCCGAG CTGGCCGCGC ATCACGGGCT GGGCGTCGCC AACGTCTTCC ATGCCGGCGA CGGCAATCTC CACCCGCTGA TCCTCTACGA TGCGCACAAG CCCGGCGACC TCGAGCGGGC CGAGGAATTC GGCAACGACA TATTGCGCCT CTGCGTCGAG GTCGGCGGGG TGCTGACCGG CGAGCATGGC GTCGGCGTCG AGAAGCGCGA CCTGATGCCC GAGATGTTCA GCGACATCGA CCTGAAGCAG CAGCAGCGCG TCAAATGCGC CTTCGATCCG GCCTCGCTGC TCAATCCGGG CAAGGTCTTC CCGACGCTGC ACCGCTGCGC CGAGCTGGGA CGGATGCACG TCCATGGCGG CGCGCTGCCC TTTCCCGATC TTCCGCGCTT CTGA
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Protein sequence | MTLRMPTPDE AVLARRAEIV AALRAIVPGE GVIDDADELR PYESDGLTAY RQPPMVVVLP ETVDQVAAVL RWCHANGVRV VPRGAGTSLS GGALPLADAV LLGMARFNRI LAIDYADRIA VVQPGVTNLA ITRAVEEEGF YYAPDPSSQI ACTIGGNVAE NSGGVHCLKY GLTTNNVLGV ELVTIEGEVL RLGGRHLDPA GLDLLGVVVG SEGLLGVVTE VTVRILPRPE TARAALIGFP TVESAGQCVA DVIAAGIIPA GMEMMDRPAI HAAEAFVQVG YPLDVEALLI VEMDGPAAEC DHLVDEVARI ADANGAVSLR VSNDDAERLA FWAGRKAAFP AVGRIAPDYY CMDGTIPRRR LPEVLRRMSE LAAHHGLGVA NVFHAGDGNL HPLILYDAHK PGDLERAEEF GNDILRLCVE VGGVLTGEHG VGVEKRDLMP EMFSDIDLKQ QQRVKCAFDP ASLLNPGKVF PTLHRCAELG RMHVHGGALP FPDLPRF
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