| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0986 |
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| Symbol | |
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| ID | 5196428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1095253 |
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| End bp | 1096242 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580532 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001261491 |
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| Protein GI | 148553909 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.613317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGGG TTCAGGGGGA CGTTGCCATG TCCGAACATC TGCTGAGCAC CGACACGGTC
CGCGCGAAGG AACGATTGCC CTATTGGTGC GACATGGTGT GCGACACCTT CGTCGAGCTC
GACTGCGAGA GCCAGGAATC CGACAGCTTC TCGGGCGAGC TGCGCAACAT CGCGTTCGGC
GCGATCCAGA TATCGATGGT GGAGTCGGTC GCGCAGCGGG TCCGCCGCAC GCGCAGCCGC
ATCGCCGGAT CGACTCGCGA CCATTTCCTG CTGAGCCTGC AACTGCGCGG CACCGGCGCG
ATCTGCCAGG ACAGCCGCGT CGCGAAGCTC TCGCCCGGCG ATTTCGCGCT CTACGATTCG
ACCCGGCCCT ATGAGCTGCG CTTCGACGAC AGCTTCTCGC AGGTCGTGCT GCGGCTGCCG
CGCGAGACGG TGACCGGGCG GCTGATCGAC AGCCATATGC TGACCGCGCG GCGGATCGAC
GGGCAGCGCG GCGTCGGGCT GCTGGCGTCG AGCTTCATCC GCCAGCTCCA CGAGCAGCGC
GCGGACATCG ACGATCTCAG CCTCGGCCGG TTGCAGGCCA ATGCGGTCGA CCTGATGGCG
ACCGCGCTCG CCGAGCAGAC CGGCGGCCAG GCGCGGACCA ACGAGGGGCA GGCGATCATC
CGCCAGCGGG TCTGCGCCTT CATCGACCGC AACCTCGGCG ACCATCGCCT GACCTGCGAG
GGGATCGCGT CCGCGCACGG CATCTCGCAG CGCTATTTGC GCAAGATCTT CGAATCCTCG
TCGACGACGG TGTCCGACTG GATCTGGTCG CGCCGGCTCG AACAGGCCAA GGCCGACCTC
TCCGACCCGC TGCTCGCCCA TGTCTCGGTG ACGGCGATCG GCTTCGACGT CGGCTTCAAG
GATGCGGCCC ATTTCAGCCG CGCCTTCCGC TCGCGCTTCG GCATGTCGCC GCGCGAATGG
CGCAACAGCG CGGGGTCGCG GCACAACTGA
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| Protein sequence | MLRVQGDVAM SEHLLSTDTV RAKERLPYWC DMVCDTFVEL DCESQESDSF SGELRNIAFG
AIQISMVESV AQRVRRTRSR IAGSTRDHFL LSLQLRGTGA ICQDSRVAKL SPGDFALYDS
TRPYELRFDD SFSQVVLRLP RETVTGRLID SHMLTARRID GQRGVGLLAS SFIRQLHEQR
ADIDDLSLGR LQANAVDLMA TALAEQTGGQ ARTNEGQAII RQRVCAFIDR NLGDHRLTCE
GIASAHGISQ RYLRKIFESS STTVSDWIWS RRLEQAKADL SDPLLAHVSV TAIGFDVGFK
DAAHFSRAFR SRFGMSPREW RNSAGSRHN
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