Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0930 |
Symbol | |
ID | 5200517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1034311 |
End bp | 1036455 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580476 |
Product | peptidase S15 |
Protein accession | YP_001261435 |
Protein GI | 148553853 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.674729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCCG GAAGCGATCG GGAGGGAGCG CGGAACCTGT CCCGCCGCGC GTTACTGGAG CTTTCCTGCG CGGCGCCGTT GGCGGCGGGC GGCGCGCGCG CGCTCGCCGC CACGGGGATC GGCCAGTCCC CGATGGGACC GCGCGAGATC AGGGTCATCG AAACGGCATG GGTGACGATG TCGGACGGGA CCCGGCTCGC CCTGCGGATC GTGCTTCCCG CCGACGCCGA CCGGAATCCG GTCCCCGCGA TCATCCAATA TTGGCCCTAT CGCCGCCGCG ACATCACCCG CTCCGAAGAC GACCGGCTGT TCAACTATTT CGCGTCGCAC GGCTATGCCT GCATCCACCC GGACATTCGC GGATCGGGCG ATTCCGAAGG GGTGCTCAAG GACGAATATC TGAAGGTCGA GCAGGACGAC GGCCTGGAGA TCATCGCCTG GGTCGCCCGG CAGAAATGGT GCACCGGAAA GGTCGGGATG ACCGGCCTGT CGTGGAGCGG CTTCAGCGCC TTGCAGATAG CGGCGCGGCG GCCGCCCGCG CTCGAGGCGA TCCTCGTCCA TGGCTGTTCC GACGATCGCT ACGGCGACGA CGCCCATTAT CTGGGCGGTA CCATCTGTCA GGACATGGGC GTGTGGGGAT CGGTGTTCTT CGCGCTCCAG GGCTATCCGC CCGATCCGCA GGTGGTGGGC GATCGCTGGC GCGCTATGTG GCGCGCCCGC TGCGAGGGGC TCGACCTGGT GATCGCCGAC TGGCTGAGTC ACCAGACGCG CGACGCGTTC TGGAAGCACG GCTCGGTCAG CGAGGATCAT GCGGCGATCC AGGTCCCGGT CTATGCGATC GGCGGTTGGG TCGACGGCTA TCCGAACGCG GTGCCCCGGC TGATGGAGCA TCTGACGGTG CCGAGGAAGG CGCTGATCGG ACCATGGGGG CACAGCTATC CGCACACCGG CGGCCCGGGG CCGTTGATCG ACTATCTCAC CGAGGCGCGG CGCTGGTGGG ACCATTGGCT CAAGGGCGTC GACACCGGCA TCATGGAGGA GCCGGCCTAT CGCGCCTGGA TGCAGGACGA CGCCGCACAT GACGGAAGCG AGACGGTGGC GGGCCGCTGG GTCGCCGAGC CCGGCTGGCC GTCATCCAAT ATCCGGTCGC GACGCCTGTT CCTCAACCGG CAGGGCCTGG CGGCGGAACC CGAGACGGGC GCTCCGCTGA CCCTCGCACC ACATCAGACG GTCGGCATCG CGGCGGGCTA TTGGTGCCCG GCCGGCGCCG GGAACAGCGA TCTGCTGCGG GTCCAGCTGC CGACCGACCA ACGGGTCGAC GATGCCCGCT CGCTGGTGTT CGACGGCGCG CCGCTCGCGG AAAGGATGGA GATCCTCGGC TTCCCCGCCG TCGACCTCGA ACTGTCGGTC GACAGGCCGG TGGCGCTCGT CGCCGTTCGT CTCGACGAGC TCCATCCCGA CGGGACCTCG CGCCGGATCA GCTATGGCGT GCTCAACCTC ACCCATCGCG ACAGCCATGA GCATCCCGCG ATGCTGGTGC CGGGGACCCG CTACAAGGTC CATGTGCCGA TGAAGCATTG CAGCATGGCC TTCAAAGCCG GCGCGCGCCT GCGGGTGGCG ATCTCGACCT CCTACTGGCC GCTGGTCTTC CCGTCGCCCG AGCCGGTGAC GCTGACCCTC TATCCGGGCG CGAGCTCGCT GATCCTGCCG GTGCGCGCGC CCAGGGCGAG CGACGCTCTG CTGAAGCCGC TCGGCGATCC GTTCGTCCCT CCCTATATCG CCGAGACGGT GCTGACGCCC GATCGCCCCC CCGCCATGAC GGTGACCCGG ACCGGCGAGG TGCAGACGAT CGAGAACCGG TCGGGTGGGG GCGCCTTCCG CGTCAATCCC GTCGGGACCG TGCTGGCCTC CGAACTGCGC GACATGTCGG TCATCGCCGA TGACGATCCG CTCAGCGCCC ATAGCGACTA TTGGGCGTCG CAGAGCTTCC GGCGCGACGA CTGGAACGCC AAGGTCGACA CGCATCTGTC GTTCCGGATG ACGAAGGACG ACTATGTCGT GACGGCGACG TTCAAGGCCT GGGACGGCGA CGCGGTCTTC TTCGAGAAAT CCTGGGAGAA GGTGATCCCG CGGACCTTCT CATAG
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Protein sequence | MGSGSDREGA RNLSRRALLE LSCAAPLAAG GARALAATGI GQSPMGPREI RVIETAWVTM SDGTRLALRI VLPADADRNP VPAIIQYWPY RRRDITRSED DRLFNYFASH GYACIHPDIR GSGDSEGVLK DEYLKVEQDD GLEIIAWVAR QKWCTGKVGM TGLSWSGFSA LQIAARRPPA LEAILVHGCS DDRYGDDAHY LGGTICQDMG VWGSVFFALQ GYPPDPQVVG DRWRAMWRAR CEGLDLVIAD WLSHQTRDAF WKHGSVSEDH AAIQVPVYAI GGWVDGYPNA VPRLMEHLTV PRKALIGPWG HSYPHTGGPG PLIDYLTEAR RWWDHWLKGV DTGIMEEPAY RAWMQDDAAH DGSETVAGRW VAEPGWPSSN IRSRRLFLNR QGLAAEPETG APLTLAPHQT VGIAAGYWCP AGAGNSDLLR VQLPTDQRVD DARSLVFDGA PLAERMEILG FPAVDLELSV DRPVALVAVR LDELHPDGTS RRISYGVLNL THRDSHEHPA MLVPGTRYKV HVPMKHCSMA FKAGARLRVA ISTSYWPLVF PSPEPVTLTL YPGASSLILP VRAPRASDAL LKPLGDPFVP PYIAETVLTP DRPPAMTVTR TGEVQTIENR SGGGAFRVNP VGTVLASELR DMSVIADDDP LSAHSDYWAS QSFRRDDWNA KVDTHLSFRM TKDDYVVTAT FKAWDGDAVF FEKSWEKVIP RTFS
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