| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0925 |
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| Symbol | |
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| ID | 5200551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1027528 |
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| End bp | 1028283 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580471 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261430 |
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| Protein GI | 148553848 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCAGTG ATCCTTCCCC GCCATCGGCA GCCGCCGCCG GCAACCCGTC GATCGGTCGC
CGCCTGGAGG GCCGCACCGC GCTGGTCACC GGAGCGCTGA GCGGGATCGG GCAGGCCGCC
GCCGATCGGC TGGAGGCCGA GGGGGCCCGC GTGTTCCGGC TCGATCTGTC CCCTGCGGAG
GGGGAGCGGC GCATCGCCGC CGACGTCTCC GACCTCAGCG CATGGCGGCA GGTGGCCGAG
CTGATCCGCG CCGAGACGCC GACGCTCGAC ATATTGGTGA ACAGCGCGGG CATCTTCGGC
CTCGGCTCGC TGGCCGAGCA CAGCGCGGAG AGCTTCTACC GCTTCTTCGC GGTCAACCAG
CTCGGGCCGG CGCTGGGCAT CAAGGCGCTG CTGCCGTTGC TGCGCCGGGC CGGCAACGCG
TCGGTGGTCA ACGTCGCGTC GGGGGCCGCG CTGTTCGGGT TCGACAATGC GCTCGGCTAT
ATGTCGAGCA AATGGGGTCT GCGCGGCGCG AGCCGCGCCC TGGCCCGCGA ACTGGCGCCC
GAGGTCCGGG TCAACTGCAT CTTCCCCGGC CTGATCGACA CGCCGATGGC GGGGATCAAT
TCCGCCGAGC GGCAATCCGA CATCGCCGAA AGGACGCCGC TCAAGCGGAT CGGCCGGCCC
GAGGAGGTCG CCGCCGCGAT CGCGTTCCTG GCCTCCGACG ACGCCAGCTA CATCACCGGA
TCGGAACTGA CCATCGACGG CGGCATCTGC GCCTGA
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| Protein sequence | MVSDPSPPSA AAAGNPSIGR RLEGRTALVT GALSGIGQAA ADRLEAEGAR VFRLDLSPAE
GERRIAADVS DLSAWRQVAE LIRAETPTLD ILVNSAGIFG LGSLAEHSAE SFYRFFAVNQ
LGPALGIKAL LPLLRRAGNA SVVNVASGAA LFGFDNALGY MSSKWGLRGA SRALARELAP
EVRVNCIFPG LIDTPMAGIN SAERQSDIAE RTPLKRIGRP EEVAAAIAFL ASDDASYITG
SELTIDGGIC A
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