| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0720 |
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| Symbol | |
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| ID | 5198316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 796023 |
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| End bp | 797234 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580264 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001261225 |
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| Protein GI | 148553643 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00588429 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCCA CCAAAGCCGC CCCGCCCCGT GTCGAGACCG ACGGCACCGT GTTCGGCATC
ATCGCCGCGA TCAGCCTGTG CCATCTGCTC AACGACATGA TGCAGTCGCT GCTGCCGTCG
ATCTATCCCA ACCTGAAGGC GGAACTCGGC CTGTCGTTCA GCCAGGTCGG GCTGGTGACG
CTGGTCTATC AGATGACCGC CTCGATCCTG CAACCGCTGG TCGGGCTCTA TGCCGACAAG
CGGCCGACCC CGCTCGCCCT GCCCGGCGGC ACGCTGTTCT CGCTGGCTGG GCTGATGCTG
CTGTCGGTCG CGCACAGCTA TGGGCTGCTG CTGGTCGGCG CGGCGCTGCT GGGGATGGGG
TCGTCGGTGT TCCACCCCGA ATCCTCGCGC GTGGCGCGGA TGGCGGCGGG CCGCCGGCTC
GGCCTGGCCC AGTCGATGTT CCAGGTCGGC GGCAATGCCG GGTCGGCGCT CGGCCCGCTC
GCGGCGGCGA TCGTGGTGCT GCGCTGGGGC CAGTCGAGCC TCGCCTTCTT CGCGATGCTG
GCCCTGCTGT CCTGCGCGAT CCTGTGGAAC GTCAGCCAAT GGTATCGCCA CCACGGCCTC
GCCCGCCTGT CGCGCGGCCA TGCCGGCCGG CAAGCGGCCC CGCCGCTGCC GCGCGGCAAG
GCACTGACCG GCATCGCCAT CCTGCTCGCG CTGATCTTCT CGAAATATTT CTACCTGGCG
AGCATCACCA GCTATTTCAC CTTCTACCTG ATCCAGCGCT TCGGCGTCAG CGTCGAGGTG
GCGCAGCTCC ATCTGTTCGT CTTCCTCGGC GCGGTGGCGG TGGGGACGAT CGCCGGCGGC
CCGCTCGGCG ACCGCTTCGG GCGCAAATAT GTGATCTGGT TCTCGATCCT CGGCGCGCTG
CCCTTCACGC TGCTGCTGCC GCATGCCAGC CTGTTCTGGA CCGGGCCGCT GACGGTGATC
ATCGGCCTGA TCCTCGCCTC GGCCTTCCCC GCGATCGTCG TGTTCGCGCA GGAGCTGGTG
CCGGGGAAGC CGGGGATGAT CTCCGGCCTG TTCTTCGGCT TCTCCTTCGG CATGGCCGGG
CTGGGCGCGG CGATACTGGG CGAGGTCGCC GACCTGGCGG GGATCGAGAT GGTCTACGCC
ATCTGCGCCT TCCTGCCGGT GATCGGCCTG CTCGCCGTGT TTCTGCCCGA TCCCGAACGC
GACCGGGGCT GA
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| Protein sequence | MNATKAAPPR VETDGTVFGI IAAISLCHLL NDMMQSLLPS IYPNLKAELG LSFSQVGLVT
LVYQMTASIL QPLVGLYADK RPTPLALPGG TLFSLAGLML LSVAHSYGLL LVGAALLGMG
SSVFHPESSR VARMAAGRRL GLAQSMFQVG GNAGSALGPL AAAIVVLRWG QSSLAFFAML
ALLSCAILWN VSQWYRHHGL ARLSRGHAGR QAAPPLPRGK ALTGIAILLA LIFSKYFYLA
SITSYFTFYL IQRFGVSVEV AQLHLFVFLG AVAVGTIAGG PLGDRFGRKY VIWFSILGAL
PFTLLLPHAS LFWTGPLTVI IGLILASAFP AIVVFAQELV PGKPGMISGL FFGFSFGMAG
LGAAILGEVA DLAGIEMVYA ICAFLPVIGL LAVFLPDPER DRG
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