Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0700 |
Symbol | |
ID | 5196299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 766969 |
End bp | 768111 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580244 |
Product | hypothetical protein |
Protein accession | YP_001261205 |
Protein GI | 148553623 |
COG category | [S] Function unknown |
COG ID | [COG3287] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.155862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0832434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCG TGGCCCAGGC GATCTCCTTC GCGTCCAGCC ATGCCGAGGC GCCCGACGAT GCGATGCGCG AGATCGCCGC CGCGATCGGC GACGAGCCGC TGGCCGGGGC GGTCGTCTTC TGCTCGCACC GCTTCGATCG CCTCGCGCTG GCGCGGGCGA TCAACCTGGC GACCGAAGGG ACGCCGGTGA TCGGCTGCAC CAGTTCGGGC GAGCTCACCC GTGGCGGCTA TGACGAGGGC AGCCTCAGCC TGATCGGCTT TCCGAGCAGC GGCTTCCATT TCGTCTCGCA CTGCTTCGAC GACATCGAGG CGTTCGACCC GATCGAGGCG CGCGAGGCGG TTCGCGCGCT GGCCGCCGTC GCCGATCGCG ACAGCCGCCG GCTGGGCGAC GCCATCAACC ATGTCGCATT GTTCCTGGTC GACGGCCTGT CGCACCGCGA GGAATTGCTG ACGATGACGA TCCAAGACGC GCTGGGCGAC ATCCCGCTGA TCGGCGGATC GTCGGGCGAC GGCCTGGCCT TTCGCGAGAC CGCGATCTTC GAGGGCGGCC GCTTCCACCG CCGCGCGGCG GTGGTCGCGA TCCTCTCCTC GCCGCGTCCG ATGCACGTCT TCAAGGCGCA GCATTACCAG CCCGGCGAAA GCAAGATGGT GATCACCGGC GCCATCCCGC ACGAACGCGT CGTCACCGAG ATCAACGCCG AGCCCGCCGC GCAGGAATAT CTGCGCCTGG CGGGCCATGC GGGCGAGGCG CTGGGCGTCG CCTTCTACGC CGCGCATCCG CCGATGGTGC GCGCGGGCGG CGAATATCAT GTCCGCTCGA TCCAGAGCGC CAATCCGGAC GGCAGCCTGA CCTTCTACTG CGCGATCGAC GAGGGGATCG TCCTGACGGT CGGCGAGCCG GTCGACCGCA TCGCGCGGAT GGAGGCGCTG TTCGGCGACA TCCGCGAGCG GGTTGGCGAG GTTGACCGGA TCATCGCCTT CGATTGCGTG CTCAACCGGA TCGATGCCGA GCAGCGCCAG CTCGGCAGCA GGGTGTCGGC GCTCTACGGC GCCAACCGGG TGATCGGCTT CAACACCTAT GGCGAGCAAT ATCACGCGCT GCACGTCAAC CAGACCTTCA GCGGGCTGGC GATCGGGAAA TGA
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Protein sequence | MTTVAQAISF ASSHAEAPDD AMREIAAAIG DEPLAGAVVF CSHRFDRLAL ARAINLATEG TPVIGCTSSG ELTRGGYDEG SLSLIGFPSS GFHFVSHCFD DIEAFDPIEA REAVRALAAV ADRDSRRLGD AINHVALFLV DGLSHREELL TMTIQDALGD IPLIGGSSGD GLAFRETAIF EGGRFHRRAA VVAILSSPRP MHVFKAQHYQ PGESKMVITG AIPHERVVTE INAEPAAQEY LRLAGHAGEA LGVAFYAAHP PMVRAGGEYH VRSIQSANPD GSLTFYCAID EGIVLTVGEP VDRIARMEAL FGDIRERVGE VDRIIAFDCV LNRIDAEQRQ LGSRVSALYG ANRVIGFNTY GEQYHALHVN QTFSGLAIGK
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