| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0662 |
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| Symbol | |
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| ID | 5196183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 719801 |
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| End bp | 721054 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640580207 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001261168 |
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| Protein GI | 148553586 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.421315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTTA CCCACATCCA GATCGCCGCC GCCAAGGCCT CAAATGGTGC TCTAAAGCTC
TCCGACGGGA GAGGACTCAC ACTTGTCGTT CAGCCCTCGG GCTCGAAGGT CTGGCGCCTC
AAATATCGGT ACGAGGGAAA GCAGAAAACA CTGCACCTGG GGCATTGGCC CAAGGTGGGG
ATCAGCGAGG CCCGCATCCG GCGAGAAGAC GCCCGCAAGC TGATTGAGGA AGGCACCGAT
CCCGCCCTCG TCAAGCGCTT CGGACCCGTC GCAGCCAAGG TCAAGATCGT GGCCGGCAAC
AGCTTCCGCG CCGTCGCCGA GGAGTGGCTG GAGAAATGCG AGCGCGAGGG CCTGTCCCAA
GTCACGCTCA ACAAGATCCG CTGGTTGCTC GACAAGGCCT ATCCTGCGCT CGGATCCAAG
CCGATCGAGG TCATCCGCCC GTTGGACGCC CTTGCCGTGC TTAAGAAGCT TGAAGCTGAA
GGCATTCTCG AATCGGCGCG GCGCCTGCGT AGTGTCCTGA GCCGCATCTT CCGCTTCGCC
GTGGCCACCG GTCGGATTGA GCGCGATGTC GCGGCCGACC TGCGCGGCGC GATCGCGACG
CCCAAGGGCA AGAATCTCGC GGCGATCACG ACCGCCCGCG AAGCGGGCGT GCTGCTGCGC
GCGATCGAGA ATTATAGCGG TCATGAGATC ACCGCGATCG CGCTCGAATG CTCGGCCCAC
CTGTTCGTCC GTCCCGGCGA ACTGCGCCAG GCCGAATGGC CCGAGTTAGA CGCCGACGAG
GCGATCTGGG CCATCCCGCC CGAAAAAACC AAAATGCGGC GCCCGCATTG GGTGCCGCTG
TCGCGGCAGA TGATGGAGAA GCTGCACCGG CTCCATGACC TGACCGGCGG CGGCAAATAT
CTGTTTCCCT GTCTGGGAAA CGACGACATG CCGATGTCCG AGAATACCGT AAACTTGGCG
CTGCGTCGGC TCGGCTTCGG GCAGGATCAG ATGACGGCCC ATGGGTTCCG GGCGATGGCA
GCCACCCTCC TCAATGAGTC CGGCCAGTGG CATCCCGATG CGATCGAGCG GCAGCTGGCG
CATATCGAGA CCAACGAGGT TCGACGAGCT TACACCCGCG GCGAATATTG GCCCGAGCGC
GTACGGATGA TGCAATGGTG GTCGGACCAT ATCGAGGAGC TGCGCCGAGC ACCGCTCGTC
CAGCGCGGCT CCTTCGGATC GGTCCCTACT CCTCCTGTCC GATTAGTTTC TTGA
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| Protein sequence | MPLTHIQIAA AKASNGALKL SDGRGLTLVV QPSGSKVWRL KYRYEGKQKT LHLGHWPKVG
ISEARIRRED ARKLIEEGTD PALVKRFGPV AAKVKIVAGN SFRAVAEEWL EKCEREGLSQ
VTLNKIRWLL DKAYPALGSK PIEVIRPLDA LAVLKKLEAE GILESARRLR SVLSRIFRFA
VATGRIERDV AADLRGAIAT PKGKNLAAIT TAREAGVLLR AIENYSGHEI TAIALECSAH
LFVRPGELRQ AEWPELDADE AIWAIPPEKT KMRRPHWVPL SRQMMEKLHR LHDLTGGGKY
LFPCLGNDDM PMSENTVNLA LRRLGFGQDQ MTAHGFRAMA ATLLNESGQW HPDAIERQLA
HIETNEVRRA YTRGEYWPER VRMMQWWSDH IEELRRAPLV QRGSFGSVPT PPVRLVS
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