| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0642 |
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| Symbol | rimO |
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| ID | 5196904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 695323 |
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| End bp | 696681 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580186 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001261148 |
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| Protein GI | 148553566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0487944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGCGC CACCCATGGC AATCGAACTC CCCTCCCCGC CGAAGATCGG CATGGTTTCG
CTTGGCTGTC CCAAGAACCT GGTCGACAGC GAACGCATCC TGACCAAGCT GCGGTCGGAC
GGCTACGGCC TGTCGCCCGA CTATGCCGGC GCCGACGTCG TCCTCGTCAA CACCTGCGGC
TTCCTCGACA GCGCCAAGGA GGAGAGCCTG GAGGCGATCG GCGAGGCGAT TGCCGAGAAT
GGCCGGGTCA TCGTCACCGG CTGCATGGGC GACGAGGCGG AGGCGATCCG CGCGCGCTTC
CCCAAGGTGC TGGCGATCAC CGGCGCGCAC CAATATGAGG AGGTGGTCGG CGCGGTCCAC
GACGCGGCGC CGGTCCCGCC CTCGCCCTAT GTCGACCTGG TGCCCGAGGC GGGGCTCAAG
CTCACCCCGC GCCACTACAG CTATCTGAAG ATCTCCGAGG GCTGCAATCA CCGGTGCAGC
TTCTGCATCA TCCCGTCGAT CCGCGGCGAC CTGGTCAGCC GCCGGCCCGA CGCGATCCTG
CGTGAGGCGG AGAAGCTGGT CGCCGCGGGC ACGCGCGAGT TGCTCGTGAT CAGCCAGGAC
ACCTCGGCCT ACGGCCTCGA CCTCAGGCAC AAGGCCTTCC CGCTGAAGGG CGGCGGCGAG
GTCCGCGCGC ACATGACCGA CCTCGCCCGC GAACTGGGCA AGCTCGGCGC CTGGGTGCGG
CTCCATTATG TCTACCCCTA TCCGCATGTC GACCATGTCA TCCCGCTGAT GGCCGAGGGG
CTGATCACCC CCTATCTCGA CATCCCGTTC CAGCATGCCA GCCCGCCGGT GCTGAAGGCG
ATGAAGCGCC CGGCCAACGA GGCGAAGGTG CTCGAACGGA TCGCCGGCTG GCGCGCGATC
TGCCCCGACA TCGCGATCCG TTCGACCTTC GTGGTCGGCT TCCCCGGCGA GACCGAGGAG
GATTTCCAAT ATCTGCTCGA CTGGCTCGAC GAGGCGCAGC TCGACCGGGT CGGCGCCTTC
CGCTTCGAGC CGGTGGCCGG CGCCGCCGCC AATGACCTGC CCGGCGCGGT GCCCGAAGAG
GTCAAGGAGG AGCGCTACGC CCGGATCATG GCGAAGACCG CCGCGATCTC GGCCGCCAAG
CTCGCCGCCA AGGTCGGCCG GACGCTCGAC GTGATCATCG ACGCGGTCGA CGATGAGGGC
GGCGCCACCG GCCGATCGCA GGCCGACGCG CCCGAGATCG ACGGCGAGGT CCATCTGCGC
GACGCGGGCG GGCTCGAACC CGGCGCCATC GTCGCGGTCG AGATCGAGGA TGCCGACGAG
CATGACCTGT TCGGCGTCCC GGTGGCTGCG GCGAGTTAG
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| Protein sequence | MCAPPMAIEL PSPPKIGMVS LGCPKNLVDS ERILTKLRSD GYGLSPDYAG ADVVLVNTCG
FLDSAKEESL EAIGEAIAEN GRVIVTGCMG DEAEAIRARF PKVLAITGAH QYEEVVGAVH
DAAPVPPSPY VDLVPEAGLK LTPRHYSYLK ISEGCNHRCS FCIIPSIRGD LVSRRPDAIL
REAEKLVAAG TRELLVISQD TSAYGLDLRH KAFPLKGGGE VRAHMTDLAR ELGKLGAWVR
LHYVYPYPHV DHVIPLMAEG LITPYLDIPF QHASPPVLKA MKRPANEAKV LERIAGWRAI
CPDIAIRSTF VVGFPGETEE DFQYLLDWLD EAQLDRVGAF RFEPVAGAAA NDLPGAVPEE
VKEERYARIM AKTAAISAAK LAAKVGRTLD VIIDAVDDEG GATGRSQADA PEIDGEVHLR
DAGGLEPGAI VAVEIEDADE HDLFGVPVAA AS
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