Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0630 |
Symbol | |
ID | 5198381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 684332 |
End bp | 684892 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640580174 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_001261136 |
Protein GI | 148553554 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.893845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAT CATCGGACGG CTCGGGTACG GTCATCATCA AGAAATACGC CAATCGCCGG CTGTATAATA CCGAAACATC GAGCTACATC ACCCTCGACC ATCTCGCCGC CATGACGCGC GAGGGGCGCG ATTTCAAGGT GATCGACGCC AAGACCGAGG AGGACATCAC CCACAACGTC CTCACCCAGA TCATCATGGA GGAGGAGAAC CGCGGCCAGA CCATGCTGCC GGTGAGCTTC CTGCGCCAGC TCATCTCGCT CTACGGCGAT TCGATGCAGT CGATGGTGCC GCAATATCTC GAAGCGTCGA TGGACGCCTT CCGCCGCAAC CAGACCCAGT TCCGCCAGGC GATGGAAGGC GCGTTCGCCG GCGGCCCGTT CGCCGAGCTG GCCAAGCGCA ACATGGAGAT GTTCGAGGCC GCCGCGAGCG CGTTCAAGCC GCAGCGCCCC GAGGGCGCGG CCAAGGACGC CCCCGCCGCC GAGACCCCGC CGCGCAGCGA AGTCGAGGCC CTCAAGGCCC AGCTCGCCGC GATGCAGGAG CAGATCAACA AGCTCAAGTG A
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Protein sequence | MAKSSDGSGT VIIKKYANRR LYNTETSSYI TLDHLAAMTR EGRDFKVIDA KTEEDITHNV LTQIIMEEEN RGQTMLPVSF LRQLISLYGD SMQSMVPQYL EASMDAFRRN QTQFRQAMEG AFAGGPFAEL AKRNMEMFEA AASAFKPQRP EGAAKDAPAA ETPPRSEVEA LKAQLAAMQE QINKLK
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