| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0578 |
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| Symbol | |
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| ID | 5200458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 627486 |
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| End bp | 628946 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580121 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001261084 |
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| Protein GI | 148553502 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCA CGCATCCGTT TGATGACGAC AAGCTGCGCG AAGAGTGCGG CGTATTCGGG
ATTTGGGGCG CGGAGACCGC CGCCGCCATG GTTGCGCTCG GCCTGCACGC GTTGCAGCAC
CGGGGGCAGG AGGCGGCCGG GATCACGAGC TGGGACGGCC ATGCCTTCCA CACCCACAGG
GCGATGGGCC ATGTCGCCGG GAATTTCGAC AAGGACGAGG TGATCCGCGG CCTGCCCGGC
CATGTCGCCT GCGGCCACGT CCGCTACTCG ACGACGGGCG AGACCGCGCT GCGCAACGTG
CAGCCGCTGT TCGCTGAACT GTCGTCGGGC GGCTTCGCGA TCGCCCATAA CGGCAATATC
TCGAACGCGA TGAAGCTGCG CCGGGAACTG GTCCGGGGCG GATCGATCTT CCAGTCGACC
AGCGACACCG AGACGATCAT CCACCTCGTC GCCATGTCGA AATACCGGAC GCTGCTCGAT
CGCTTCATCG ATGCGCTCAA GCAGGTCGAG GGCGCCTATT CGCTGATCTG CATGACGCCC
GAGGGCATGA TCGCCTGCCG CGATCCGCTC GGCATCCGTC CGCTGGTGCT CGGCCGGGTC
GGCGACGCCT ATATCTTCGC GTCGGAGACG GTCGCGCTCG ACGTGGTCGG CGCCACCTTC
ATCCGCCAGG TCGAGCCGGG CGAGCTGGTG ATCGTGTCGG AGGGCGGGCT GCGCTCGATC
CGGCCGTTCG CCGACGTCCG CGCGCGGCCC TGCATCTTCG AGCATGTCTA TTTCTCGCGG
CCCGATTCGA TCGTCGACGG CTCGTCGGTC TATTCGGTGC GCAAACGGAT CGGCGCGCAG
CTCGCGATCG AGAACGGCGT CGACGCCGAC CTCGTCGTCC CCGTCCCCGA CTCGGGCACG
CCCGCCGCGA TCGGCTATGC CCAGCAATCG GGCATTCCGT TCGAGCTCGG CATCATCCGG
TCGCACTATG TCGGCCGCAC CTTCATCCAG CCCGGCGACC AGGTCCGCCA TCTCGGCGTC
AAGCTCAAGC ACAACGCCAA CCGCGCGCTG ATCGACGGCC AGCGGCTCGT GCTGATCGAC
GATTCGATCG TCCGCGGCAC GACCAGCGTG AAGATCCTCC AGATGCTCCG TGATGCCGGC
GCGCGCGAGG TGCACCTGCG CATCGCCAGC CCGCCGACCC GGCACAGCTG CTTCTACGGC
GTCGACACGC CCGAACGCGC CAAGCTGCTC GCCGCGCAGA TGAACGTCGC GGAGATGGCC
GCCTATATCG GCGCGGACAG CCTCGCCTTC CTGTCGATCG ACGGCCTCTA CAAGGCGCTG
GGCGACGAAG GCCGGGTCGA TCGCGCGCCG ACCTTCTGCG ACGCCTGCTT CACCGGCGAC
TATCCGACCC ACCTCACCGA TCATGAGGAA CTGACCCCGA CCGACCAGCT TGCCCTGCAC
GGCGAGCGGG TCGTCGCCTG A
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| Protein sequence | MLTTHPFDDD KLREECGVFG IWGAETAAAM VALGLHALQH RGQEAAGITS WDGHAFHTHR
AMGHVAGNFD KDEVIRGLPG HVACGHVRYS TTGETALRNV QPLFAELSSG GFAIAHNGNI
SNAMKLRREL VRGGSIFQST SDTETIIHLV AMSKYRTLLD RFIDALKQVE GAYSLICMTP
EGMIACRDPL GIRPLVLGRV GDAYIFASET VALDVVGATF IRQVEPGELV IVSEGGLRSI
RPFADVRARP CIFEHVYFSR PDSIVDGSSV YSVRKRIGAQ LAIENGVDAD LVVPVPDSGT
PAAIGYAQQS GIPFELGIIR SHYVGRTFIQ PGDQVRHLGV KLKHNANRAL IDGQRLVLID
DSIVRGTTSV KILQMLRDAG AREVHLRIAS PPTRHSCFYG VDTPERAKLL AAQMNVAEMA
AYIGADSLAF LSIDGLYKAL GDEGRVDRAP TFCDACFTGD YPTHLTDHEE LTPTDQLALH
GERVVA
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