Gene Swit_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0558 
Symbol 
ID5200555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp610485 
End bp610751 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content65% 
IMG OID640580101 
Productglutaredoxin 3 
Protein accessionYP_001261064 
Protein GI148553482 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02181] Glutaredoxin, GrxC family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0977481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCA TGCCCAAGGT CGAAATCTAC ACCAAGGCCT TCTGCCCCTA TTGCTCGCGC 
GCCAAGGCGC TGCTCGAGAC GAAGGGCGTC GGTTTCGAGG AATATGACAT CAGCATGGGC
GGCCCGAAGC GCGCCGAGAT GATCGAGCGC GCCCGGGGCG GATCGACCGT GCCGCAGATC
TTCATCGACG ACCGCCACAT CGGCGGCTGC GACGACATGT TCGCGCTCGA TCGCCAGGGC
AAGCTCGACC CGCTGCTGGC GGCCTGA
 
Protein sequence
MDRMPKVEIY TKAFCPYCSR AKALLETKGV GFEEYDISMG GPKRAEMIER ARGGSTVPQI 
FIDDRHIGGC DDMFALDRQG KLDPLLAA