Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0538 |
Symbol | |
ID | 5200575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 588481 |
End bp | 589779 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580079 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001261044 |
Protein GI | 148553462 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0332131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAC TGGTCGTGCA GCGGCTTTCA TTTGCGCTTC GGGCCCGATC GGGGCAGTCT GCTGACAGCG ATGTTCGCGG CGGCGGCCGC GTGAAGGAAT GCCGGACGAT GACCTTGCGT GTCGTGAAGG AAGTGGGGTC GGCGATCGAT CCCGATGCGA ATTTCGGCCT GCCGGGCTGG ATCTACCATG ATCCGGAGAT ATTCGCGCTG GAGCAGGAGC GGATCTTCCG CCGGTCGTGG CAGCTCGTCT GCCATCTCAA CGACATTCCG GCCAGGGGCG ACTGGCAGTC GCTGGAGATC GGCCATGAGG CGATCATCGT CGTGCGCGGC GAGGATGGCG AGGTGCGGGC GCTGTCCAAC ACCTGCCGTC ACCGCGCGTC GCGACTGGTC GACGGTGCCG AGGGCTGCGC CAGGAAACTG ATCTGTCCCT ATCACGCCTG GACCTACGAG CTGGACGGCC GGCTGTCGGG GGTGCCCGGC AAGCGCGACT ATCCCGCCTT CGACATGGCC GATTACGGCC TCCACAGTTT CCCGGTCGAG GTTTGGCGCG GCTTCATCTT CGTCAACATC GAAGGCGAGG GGCCTTCGGT CGCCGAGATG ATGGCTCCCT ATGAGGAGGA GGTCGCGCCC TATCGCTTCG AGGAGATGAA GGCGCTCGGC CGCGTCGTGA TGCGCCCGCG CACCGTCAAC TGGAAGAACA TCGCCGACAA TTATTCGGAC GGCCTGCATA TCCCGGTCGC GCATCCGGGG CTCAAGCGGC TGTTCGGTCC CGGCTACGGC ATCGAGGCGA AAGCCTGGGC CGACAAGATG TGGGGGCCGT TGCTCGAAGG CGTGCCGGGC AGTTCGTCCG AGGCGCTCTA TCGCAAATAT CTGCCGCAGG TGGCGCATCT GCCCGCCGAC CGGCAGCGGC TGTGGATCTA TTTCAAGCTG TGGCCGAACA CGGCGTTCGA CATCTATCCC GACCAGATCG ACTTCATGCA GTTCATCCCC GTCTCGCCGA CCGAGACGAT GATCCGCGAG ATCGCCTATG TCCTGCCCGA CGAGCGGCGC GAGATGAAGG CGGCGCGCTA CCTCAACTGG CGGATCAACC GCATGGTCAA TGCCGAGGAC ACGAAGCTGG TCGCGCGGGT GCAGGACGGC ATGGCGACGC AGAGCTATAC GCAAGGCCCG CTCGGCACCG GCGAGGTCTG CCTCAGGAGC TTCGCCCGCA AGATGCGCAC GCTGATCCCG GAGACGCGCC TGCCGACCCG CCCGCCCGCG GGCTGGAGCA CGAAGAGCGT CGCGGGGCGC CTCGCATGA
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Protein sequence | MARLVVQRLS FALRARSGQS ADSDVRGGGR VKECRTMTLR VVKEVGSAID PDANFGLPGW IYHDPEIFAL EQERIFRRSW QLVCHLNDIP ARGDWQSLEI GHEAIIVVRG EDGEVRALSN TCRHRASRLV DGAEGCARKL ICPYHAWTYE LDGRLSGVPG KRDYPAFDMA DYGLHSFPVE VWRGFIFVNI EGEGPSVAEM MAPYEEEVAP YRFEEMKALG RVVMRPRTVN WKNIADNYSD GLHIPVAHPG LKRLFGPGYG IEAKAWADKM WGPLLEGVPG SSSEALYRKY LPQVAHLPAD RQRLWIYFKL WPNTAFDIYP DQIDFMQFIP VSPTETMIRE IAYVLPDERR EMKAARYLNW RINRMVNAED TKLVARVQDG MATQSYTQGP LGTGEVCLRS FARKMRTLIP ETRLPTRPPA GWSTKSVAGR LA
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