| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0457 |
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| Symbol | |
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| ID | 5196513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 489235 |
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| End bp | 490455 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579996 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001260963 |
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| Protein GI | 148553381 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0527606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA TCAAGGTGAA AACTCCCGTC GTCGAGCTCG ACGGCGATGA AATGACGCGG
ATCATCTGGC AATGGATTCG CGAGCGCCTG ATCCTCCCCT ATCTCGACAT CGGCCTGGAA
TATTACGACC TGTCCGTCGA GAAGCGCGAC GAGACCAACG ACCAGATCAC CATCGACAGC
GCCAAGGCGA TCCAGAAGTA CGGCGTCGGC GTGAAGTGCG CGACGATCAC CCCGGACGAG
GCCCGCGTCG AGGAATTCAA GCTCAAGAAG ATGTGGAAGT CGCCGAACGG CACGATCCGC
AACATCCTGG GCGGCGTCGT GTTCCGCGAG CCGATCGTGA TCAAGAACGT CCCCAGGCTG
GTGCCGGGCT GGACCGATCC GATCGTCGTC GGCCGTCACG CCTTCGGCGA CCAGTATCGC
GCCACCGACT TCCTCGTCCC CGGCCCCGGC AAGCTCCGCA TGATCTGGGA AGGCGACAAT
GGCGAGACCA TCGAGCATGA GGTCTTCCAA TATCCGTCGG CCGGCGTCGC GATGGGCATG
TACAATCTCG ACGAGTCGAT CCGCGACTTC GCCCGCGCCA GCATGAACTA TGCGGTCGAT
CGCGGATGGC CGCTCTATCT CTCGACCAAG AACACCATCC TCAAGGCCTA TGACGGCCGC
TTCAAGGACC TGTTCCAGGA CGTGTTCGAC GCCGAGTTCG CCGACAAGTT CAAGGCGCGC
AACATCGTCT ACGAGCATCG CCTGATCGAC GACATGGTCG CCTCGGCGCT CAAGTGGAGC
GGCAAGTTCG TCTGGGCCTG CAAGAATTAC GACGGCGACG TCCAGTCGGA CACCGTCGCG
CAGGGCTTCG GCTCGCTCGG CCTGATGACC TCGGTGCTGA TGTCGCCGGA CGGCAAGACG
ATCGAGGCCG AGGCGGCGCA CGGCACCGTC ACCCGCCACT ATCGCATGCA CCAGGCGGGC
AAGCAGACCT CGACCAACCC GATCGCCTCG ATCTTCGCCT GGACGCAGGG CCTGCAGTTC
CGCGGCAAGT TCGACGGTAC CCCCGACGTG GTCAAGTTCG CCGAGACGCT CGAGCGCGTC
TGCATCCAGA CCGTCGAGAA GGGCGGGATG ACCAAGGACC TCGCGATCCT GATCGGCCCG
GACCAGCCCT GGATGACCAC CGAGCAGTTC TTCGAGCAGA TCCGCGTCAA CCTCGAAGCC
GAGATGGCGA ACTGGAAGTA A
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| Protein sequence | MAKIKVKTPV VELDGDEMTR IIWQWIRERL ILPYLDIGLE YYDLSVEKRD ETNDQITIDS
AKAIQKYGVG VKCATITPDE ARVEEFKLKK MWKSPNGTIR NILGGVVFRE PIVIKNVPRL
VPGWTDPIVV GRHAFGDQYR ATDFLVPGPG KLRMIWEGDN GETIEHEVFQ YPSAGVAMGM
YNLDESIRDF ARASMNYAVD RGWPLYLSTK NTILKAYDGR FKDLFQDVFD AEFADKFKAR
NIVYEHRLID DMVASALKWS GKFVWACKNY DGDVQSDTVA QGFGSLGLMT SVLMSPDGKT
IEAEAAHGTV TRHYRMHQAG KQTSTNPIAS IFAWTQGLQF RGKFDGTPDV VKFAETLERV
CIQTVEKGGM TKDLAILIGP DQPWMTTEQF FEQIRVNLEA EMANWK
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