| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0390 |
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| Symbol | |
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| ID | 5196695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 417204 |
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| End bp | 419606 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579930 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001260898 |
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| Protein GI | 148553316 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.754053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.273215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGA CCCTTCCCGT ATTGCCGTTG CGCGATATCG TCGTTTTCCC GCACATGATC
GTGCCCCTGT TCGTCGGACG CGAGAAGTCG GTCGCCGCGC TGGAAAGCGC GATGGCGGCG
GACAAGTCGA TCTTCCTCGT CGCCCAGCTC GATCCGGCCG AGGACGATCC CGATCGCGAT
GCGCTCTATG ATCTCGGCGT CGTCGCGACG GTGCTCCAGC TTCTCAAGCT GCCCGACGGC
ACCGTCCGCG TGCTCGTCGA AGGCAAGCAG CGCGCCCGGC TCGAGGCGCT GACCGGCGAG
GACGCCCACC TGACCGCCGA GGTCGAGCTG ATCGAGGAGG CCGAGGCCGA AGGGACCGAG
GTCGCCGCGC TGATGCGTTC GGTGGTCGAC CAGTTCGAGA ATTATGCGCG GCTCAACAAG
AAGCTGCCGG CCGAGACCTC GGTCCAGCTC GGCCAGATCG AGGAGGCCGC GAAGCTGGCC
GACGCGGTCG CCGCCAACAT CTCGATCAAG GTTTCCGACA AGCAGGCGCT GCTGGTCGAA
CTCGATCCCG CCAAGCGGCT CGAAATGGCG TTCGCGCTGA TGGAAGGCGA GCTCGGCGTC
CTCCAGGTCG AGAAGAAGAT CCGCAGCCGC GTCAAGCGCC AGATGGAGAA GACGCAGCGC
GAATATTATC TGAACGAGCA GCTCAAGGCG ATCCAGCGCG AGCTGGGCAA TGGCGAGGGC
GAGGACGGCG GCGACGAGCT GAGCGAGCTC ACCGCGAAGA TCGCCAAGCT CAAGCTGTCC
AAGGAAGCGC GCGGCAAGGC CAATGCCGAG CTCAAGAAGC TGCGCACCAT GGCGCCGATG
TCGGCCGAGG CGACCGTCGT CCGCAACTAT CTCGACGTGC TGCTGGGCCT GCCCTGGGGC
AAGAAGTCGA AGCTCAAGAA GGACATCGCC GCCGCGCAGG CGGTGCTCGA CGCCGATCAT
CACGGGCTGG AGAAGGTCAA GGACCGGATC GTCGAATATC TCGCCGTCCA GGCGCGCACC
AACAAGCTCA AGGGGCCGAT CCTGTGCCTC GTCGGTCCGC CCGGCGTCGG CAAGACCTCG
CTCGGCCGCT CGATCGCCAA GGCGACCGGG CGCGAGTTCG TGCGCCAGTC GCTCGGCGGC
GTCCGTGACG AGGCCGAGAT CCGCGGCCAC CGGCGCACCT ATATCGGCTC GCTGCCCGGC
AAGATCGTCA CCAACCTGAA GAAGGCGGGC ACGTCGAACC CGTTGTTCCT GCTCGACGAG
ATCGACAAGC TCGGCCAGGA TTTCCGCGGC GATCCCGCCT CGGCGCTGCT CGAGGTGCTC
GATCCCGAGC AGAACAGCAA GTTCCAGGAC CATTATCTGG AGATCGACGT CGACTTGTCC
GACGTGATGT TCGTGTGCAC CGCGAACAGC CTGAACCTGC CGCAGCCGCT GCTCGACCGC
ATGGAGATCA TCCGCCTCGA AGGCTATACC GAGGACGAGA AGGTCGAGAT CGCCAAGGAG
CATCTGCGCG ACAAGCAGGT CGAGGCGCAT GGCCTGAAGG CCGGCGAGTT CGAGCTGACC
GACGCCGGGC TGCGCGACCT GATCCGCTAT TATACCCGCG AGGCAGGCGT CCGCACGCTG
GAGCGCGAGA TCGCCAAGCT CGCGCGCAAG AGCCTGCGCC GCATCCTCGA GGGCAAGGAC
GAGAAGGTCG TCATCACCCC CGACAACCTG TCCGACTTCG CCGGCGTGCG GAAATACCGC
TTCGGCATCG GCGAGGAGGA GGACCAGGTC GGCGCCGTCA CCGGGCTCGC CTGGACCGAG
GTCGGCGGCG AGCTGCTGAC GATCGAGGCG GTCACCGTGC CCGGCAAGGG CGGGATCAGC
ACGACCGGCA AGCTCGGCGA CGTGATGAAG GAGAGCGTCC AGGCGGCGTT CAGCTTCGTC
AAGGCGCGCG CGCCGGCCTA TGGCATCAAG CCGAGCCTGA TCGCCCGAAA GGACATCCAC
ATCCACCTGC CCGAGGGCGC CGTTCCCAAG GACGGCCCGT CGGCGGGCAT CGGCATCACC
ACCGCGATCG TCTCGACCCT GACCGGCATC CCGGTCCGCA AGGAAGTGGC GATGACCGGC
GAGGTGACGC TGCGCGGCCG CGTCCTGCCG ATCGGCGGCC TCAAGGAGAA GCTGCTCGCG
GCCCTGCGCG GCGGCATCAC CACGGTGCTG ATCCCCAAGG AGAACGAGAA GGACCTCGTC
GAGATCCCGA CCAATATCCG CGAGGGGCTG AAGATCATCC CCGTCAGCCA TGTCGACGAG
GTGCTGGGCC TGGCGCTGGC CGGCCACCTC ACCGCGATCG ACTGGACCGA GGCGGACGAG
CTGGCGTCGA CGCTGAAGGG CGCGACCAGC CCCGACGGCG GCGAGGTGGC CGTCCGGCAT
TGA
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| Protein sequence | MTETLPVLPL RDIVVFPHMI VPLFVGREKS VAALESAMAA DKSIFLVAQL DPAEDDPDRD
ALYDLGVVAT VLQLLKLPDG TVRVLVEGKQ RARLEALTGE DAHLTAEVEL IEEAEAEGTE
VAALMRSVVD QFENYARLNK KLPAETSVQL GQIEEAAKLA DAVAANISIK VSDKQALLVE
LDPAKRLEMA FALMEGELGV LQVEKKIRSR VKRQMEKTQR EYYLNEQLKA IQRELGNGEG
EDGGDELSEL TAKIAKLKLS KEARGKANAE LKKLRTMAPM SAEATVVRNY LDVLLGLPWG
KKSKLKKDIA AAQAVLDADH HGLEKVKDRI VEYLAVQART NKLKGPILCL VGPPGVGKTS
LGRSIAKATG REFVRQSLGG VRDEAEIRGH RRTYIGSLPG KIVTNLKKAG TSNPLFLLDE
IDKLGQDFRG DPASALLEVL DPEQNSKFQD HYLEIDVDLS DVMFVCTANS LNLPQPLLDR
MEIIRLEGYT EDEKVEIAKE HLRDKQVEAH GLKAGEFELT DAGLRDLIRY YTREAGVRTL
EREIAKLARK SLRRILEGKD EKVVITPDNL SDFAGVRKYR FGIGEEEDQV GAVTGLAWTE
VGGELLTIEA VTVPGKGGIS TTGKLGDVMK ESVQAAFSFV KARAPAYGIK PSLIARKDIH
IHLPEGAVPK DGPSAGIGIT TAIVSTLTGI PVRKEVAMTG EVTLRGRVLP IGGLKEKLLA
ALRGGITTVL IPKENEKDLV EIPTNIREGL KIIPVSHVDE VLGLALAGHL TAIDWTEADE
LASTLKGATS PDGGEVAVRH
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