| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0380 |
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| Symbol | |
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| ID | 5198166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 404177 |
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| End bp | 404977 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579919 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260888 |
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| Protein GI | 148553306 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.461648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGC TTTTTTCGCT GGAAGGGCGG ACCGCGATGG TGACGGGCGC GTCGCGCGGG
CTGGGGCGCG CCATCGCGCT GGGCCTCGCC GATGCGGGCG CCTCGCTGAT CCTGGCGGCG
CGCGACGCGG CGAAGCTGGG CGAGGTGGCC GACGAGGTCC GCGCCAAGGG CCGCGACGCC
CGGATCGTCA CCTTCGACCT CGCCGACATG GCCTCGGTCG AGGCGGCGGC CCGTGGGCTG
GTCGACGAGG GCGCGCCGAT CGACATCCTC GTCAACAATG GCGGGATCGC CGAATGGGGG
CCGCTGCACG GGTCGAGCCT CGACCATTGG GAACGGACCT TCGACGTCAA CGTCTCGGCC
ATCTACCTGT TGTGCCGCGA GCTATCCAAG CCGATGGCCG AACGCGGATG GGGACGGATC
ATCAACTTCG CCTCCTATGT CGCCGAGACT GGTCGACCCA ATCTGTCGGC CTATGTCGCC
AGCAAGCATG CGGTGCTGGG GCTGACCCGC GCCGTCGCCG CCGATCTCGC GCCGCATGGC
GTCACCTGCA ACGCCATCGC GCCCGGTATC TTCCTGACCG ACATGGCCGC GCCGACCGCC
GGCCATCCAC AGCGCGCCAA GATATTCCGC GACGCGATCG CGATCGGGCG GTTCGGCGAC
CCGGCCGAGA TCGTCGGTCC GGTCCAGTTC CTCGCCTCGG AAGCCTCGCG CTACGTGACC
GGCCATATGC TGCCGGTCGA CGGCGGCATC GCGAACATAT TGTCGCTGCC GGTCGTCGTC
GAAGGCGGAT CGCTGGACTG A
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| Protein sequence | MTALFSLEGR TAMVTGASRG LGRAIALGLA DAGASLILAA RDAAKLGEVA DEVRAKGRDA
RIVTFDLADM ASVEAAARGL VDEGAPIDIL VNNGGIAEWG PLHGSSLDHW ERTFDVNVSA
IYLLCRELSK PMAERGWGRI INFASYVAET GRPNLSAYVA SKHAVLGLTR AVAADLAPHG
VTCNAIAPGI FLTDMAAPTA GHPQRAKIFR DAIAIGRFGD PAEIVGPVQF LASEASRYVT
GHMLPVDGGI ANILSLPVVV EGGSLD
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