Gene Swit_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0329 
Symbol 
ID5200886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp350535 
End bp351617 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content72% 
IMG OID640579869 
Producthypothetical protein 
Protein accessionYP_001260838 
Protein GI148553256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0029643 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC TGCGGCTGCC GCTGCTGCCG GAGGAGGTGA CGGCCGCCTG GCTGGGCGAG 
GCGCTGTCCG TCTATGCGCC CGGCATTGTC GTCGAGCGGA TCGAGGTCAC CGATATCCTC
TGGGGCACCG GCACCAAGAT GATGATCACC GCCGCCTATG ACCGGGCCGG CCGCGATGCG
GGCCTGCCCG AGCGATTGTG CGTCAAGGCC GGGCTCGCCG AGCATCGCGA GCTGGTCAAA
TTCTGCTACC AGACCGAAGC CCGCTTCTTC GCCGAGGTCG CGCCCCGCCT GTCGATCGGC
CTGCCGCGCT GCTTCTTCGC GGCGGCCAAT GCCGATCAGG GCGTCGTGAT CATGGAGGAC
CTGCGCCCGG CCGGCGCGCA GATCTGCCGG GTGCAGCAGC CGCTCTCCCG CGACCAGGCC
GCCGCCTTCC TCGACGATCT GGCGGCGCTC CACGCGCGGT GGTGGAACGG CCCGGCGCTG
GCCGACGGGG GCGAACTGGG CTGGCTGATG CGGCACGATC CGCTGCCCGA CGCGGCGTGG
GGCGATTTCG GGCGCGGTCA GCTCCAGCCC GAGACCTGGG CGCATTATAT GGGCCTGCCG
CGCTCGCTCG GCATCCCGCG CGTCTGCCGT GACCGGGAGA CGATGCACGC CGCGCTCCAG
GCGCTGCGCC GCTTCGCGCC CGGTGGGCCG ACCTGCGTGA TCCATGGCGA CGCGCATCTT
GGCAACATGT ACCTCGACGC CGCGGGGCGG CCTGGCTTCC TCGACTGGCA GACCGCGCGG
CGCGGCCATT GGGCGCAGGA CGTCACCTAT TTCTACGTGT CGGCGCTCGA CCCGCTCGAT
CGCCGCGCCT GGGAGCGCGA TCTGATCGCG GGCTATCTCG CCGCGCTGGG ACGGCATGGC
GTGGCCGACG CGCCGGGCGA GGCGGAAGCC TGGGCGGCGA TCCGCGCGCA TATCGTCTAC
GGCCTGTTCT ACTGGATGGT GAACCCCGTC GAATGGCAGG CCGAGGAGAA TAATGCGGCC
GTGGCGCCGC GCTTCGGCTG GGCGGCGGTC GACCTCGGCG CGCCGCCGGC CGCTGCTGTG
TAG
 
Protein sequence
MSDLRLPLLP EEVTAAWLGE ALSVYAPGIV VERIEVTDIL WGTGTKMMIT AAYDRAGRDA 
GLPERLCVKA GLAEHRELVK FCYQTEARFF AEVAPRLSIG LPRCFFAAAN ADQGVVIMED
LRPAGAQICR VQQPLSRDQA AAFLDDLAAL HARWWNGPAL ADGGELGWLM RHDPLPDAAW
GDFGRGQLQP ETWAHYMGLP RSLGIPRVCR DRETMHAALQ ALRRFAPGGP TCVIHGDAHL
GNMYLDAAGR PGFLDWQTAR RGHWAQDVTY FYVSALDPLD RRAWERDLIA GYLAALGRHG
VADAPGEAEA WAAIRAHIVY GLFYWMVNPV EWQAEENNAA VAPRFGWAAV DLGAPPAAAV