| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0304 |
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| Symbol | |
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| ID | 5199115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 322008 |
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| End bp | 322832 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640579844 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260813 |
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| Protein GI | 148553231 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.709092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC CCCTGAGCTA TCACGACCGC CTCGCCGGCC AGGCCGCCAT CGTCACCGGC
GCCGGCGCGC CCGGCGAGGA GATGGGCAAT GGCCGCGCCA TCGCGCTGCT GTTCGCGCGC
GAAGGCGCCC GGGTCTGCGT CGTCACCCGC GACCGCGCCA ATGCCGAGCG CACCGTGGCG
ATGATCGAGG CGTCGGGCGG CGAAGCCGTC GCCTGCACGG GCGACGTCAC CCGCGCGGAG
GATTGCGAGC GGATCGTCGC CGAGGCGCTC GCCGCCTTCG GCACCCTCGA CATATTGGTC
AACAATGTCG GCCGTGGCTT CGGCGGACCG AAGCTCGCCG ACATCGACGA CGCGACCTGG
CGGGAGATCG TCGACGTCAA CCTGACCGGC GCCTTCCACA TGTGCCGGGC GGCGATGCCG
GCGCTGGCCG AGGGGCGCGG CAAGGCGATC GTCAACATCT CCTCGACCGC CGGCCAGCGC
GCGCACGGAT CGCTCGGCTA CGGCCCCGCC AAGGCCGCGC TCGACGCCTT CACCCGCGAG
ATCGCGACCG TCTACGGCCG CCAGGGCATC CGCGCCAACA TCGTCTCCCC CGGCCATCTC
CACACGCCGC ACGTCGCCAA CAACCCGCAG CTCGCCCCGC TGCGCGAGAA GCGCCGCAAG
GTCGGCCCGC TCGGCATCGA GGGCGACGCC TGGGACGTCG CGGCGGCGAC ATTGTTCCTC
GCCTCGCCGG AGGCGCGGCT GATCACCGGC GTCCTGCTGC CGGTCGACGC CGGCGTCAGC
CAGATCGCGG GGATGACCGG CCACAGCCTG ATCGAGAGCC CCTAA
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| Protein sequence | MPEPLSYHDR LAGQAAIVTG AGAPGEEMGN GRAIALLFAR EGARVCVVTR DRANAERTVA
MIEASGGEAV ACTGDVTRAE DCERIVAEAL AAFGTLDILV NNVGRGFGGP KLADIDDATW
REIVDVNLTG AFHMCRAAMP ALAEGRGKAI VNISSTAGQR AHGSLGYGPA KAALDAFTRE
IATVYGRQGI RANIVSPGHL HTPHVANNPQ LAPLREKRRK VGPLGIEGDA WDVAAATLFL
ASPEARLITG VLLPVDAGVS QIAGMTGHSL IESP
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