Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0275 |
Symbol | |
ID | 5197564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 290959 |
End bp | 292200 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640579815 |
Product | amidohydrolase |
Protein accession | YP_001260784 |
Protein GI | 148553202 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.362841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTGC TTTTCGCGGG CGGGAAGGTC TGGGACGGTC TGGCCGAGGA GGCCGTGGCC GCCGACGTGC TGATCGAGGA CGGGATGGTC GCCATGGTCG GCGCCGTCCC GGCGGGGCGC TGCGAGGGCG CGCGGCGGGT CGACGCGCGC GGCGCGACCC TGATCCCCGG CATGGTCGAC GCGCACGCCC ATCTGAGCTT TCCCGTCGTC ACCTACGCCT ATCAGATCGA GGACACGCCG CCCGAGGAGA CGGTGCTGAT CACGATGCAC AATGCCCGCA TCCTGCTCGA TGCCGGCTTC ACCGGGGTGG TGGGGGCGGG ATCGCCCAAG CTCCGCGCCG AGGTCGTGAT CCGCAACGAG ATCGAGGCGG GGCGCATCCC CGGCCCGCGC CTGATGGCGT CGACGCCGAC GCTGACCGCC ACCGGCGGAC TGAACGACAC CGCCCAGCTC CACCAGGGGC GCGACGTGGC GGCGATGGTG GTCGACGGGG CGGACGCCTG CCGCCGCGCG GTGCGGACCG GCTATCGCGA GGGCGTCGAC CTGGTGAAGG TCAACGTCTC GGGCGACGAT TTCTTCCCGC GCCCGTCGGG CCGCACCACG ACCCTGGCCG AGGACGAGAT GCGGGCGATC GGCGAGACCT GCGCCGCGCT CGGCCTGCCG ATCAGCGCGC ATGCCCGCTC GGCGGAGTCG ATCAAGCGCG CGCTGCGCGC CGGCGCGACC CTGATCAACC ATGCCGATTT CGCCGACGAG GAGGCGCTCG ACATGCTCGA GGCGGCGAAG GACCGCGTCT TCGTGGCGCC GACGATCGGC TATTATCACA GCCTGCTCCA CGACAGCCCG TTCGACCGCG CCACGCTCGA CCGGATGGGC GTCGAGGCGG CGATGGAGGC GAATGTCGAG GTGCACCGCA CGCTCCGGCG GCGCGGGGTG CGCGCGGTGA TCGGCGGCGA CTATGGCCTC GCCTGGCAGC CCAACGGCGG CAACGCGCGC GACGTCGCGC ATTTCGTCAC CTATCTCGGT TATTCGCCGC GCGAGGCGCT GGTCGCCGCG ACCCGCAATG GCGGCGAACT GATGGGCATG GGGGCGGGCA GGATCGCGCC GGGCGCGCCG GCCGACCTGC TGCTGGTCGA CGGCGATCCG CTCGTCGATC CGACGCTGCT CGCCCGATCC GACGCGTTGC TCGCGATCGT CAGGGGCGGC GGCCTGCATA AGGCGCCGGC CGTCCCGGAG CGGGCTGCGT GA
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Protein sequence | MKLLFAGGKV WDGLAEEAVA ADVLIEDGMV AMVGAVPAGR CEGARRVDAR GATLIPGMVD AHAHLSFPVV TYAYQIEDTP PEETVLITMH NARILLDAGF TGVVGAGSPK LRAEVVIRNE IEAGRIPGPR LMASTPTLTA TGGLNDTAQL HQGRDVAAMV VDGADACRRA VRTGYREGVD LVKVNVSGDD FFPRPSGRTT TLAEDEMRAI GETCAALGLP ISAHARSAES IKRALRAGAT LINHADFADE EALDMLEAAK DRVFVAPTIG YYHSLLHDSP FDRATLDRMG VEAAMEANVE VHRTLRRRGV RAVIGGDYGL AWQPNGGNAR DVAHFVTYLG YSPREALVAA TRNGGELMGM GAGRIAPGAP ADLLLVDGDP LVDPTLLARS DALLAIVRGG GLHKAPAVPE RAA
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