Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0273 |
Symbol | |
ID | 5197562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 288229 |
End bp | 289152 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579813 |
Product | hypothetical protein |
Protein accession | YP_001260782 |
Protein GI | 148553200 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.890327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.327592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCGC CCGATGCCCC GCCCTCCTTC GAGATGGAGC GTATCAAGCA GGAGATCGCC GACAGCTTCG ACGAGGAGCT GGAGATGGAG ATCGACGAGA GCCGCCTGGA GGCGATGCTC GGCGAGCTGG CCGAGCATCC GGAGCAGGAG CAGCTCGACC GGCGCCTCTA TTTCCGCGAA CTGTTCCGCC TGCAGCATGA GCTGGTGCGG CTGCAGGACT GGGTCCAGCA CAGCGGGCTC AAGGTGCTGG TGATCTTCGA AGGGCGCGAT TCCGCGGGGA AGGGTGGGGT GATCAAGCGC ATCACCCAGC GGCTCAATCC GCGCGTCTGC CGCGTCGTCG CGCTGCCCGC GCCCAATGAG CGCGAGCGGA CCCAATGGTA TTTCCAGCGC TACACCGCGC ACCTGCCCGC CGCCGGGGAG ATCGTGCTGT TCGACCGGAG CTGGTACAAC CGCGCGGGCG TCGAGCGGGT GATGGGCTTC TGCACCGAGG ACGAGGTCGA GGAATTCTTC CGCTCCGTCC CCGCGTTCGA GCGGATGCTG GTCCGTTCGG GCATCATCCT GCTCAAATAT TGGTTCTCGA TCACCGACGA CGAGCAGCAG TTCCGCTTCA ACATGCGGAT CCACGATCCG CTCAAGCAGT GGAAGCTATC CCCGATGGAC GTCGAATCGC GGCGGCGCTG GGAGGACTAT ACCCGCGCCA AGGAGGCGAT GCTGGAGCGG ACCCATATCG AGGAGGCGCC CTGGTGGATC GTCGAGGCGG TCGACAAGAA GCGCGCCCGC CTCAACTGCA TCGCCCATCT GCTCGGGCGG ATTCCCTATG ACGAGGCGCC GCGCCCGTCG GTGGTCCTGC CGGCGCGGGT GCGGCACGAC GACTATATCC GCCACCCGGT CCCGCGCGAG ATGTACGTTC CCGAAATCTA CTGA
|
Protein sequence | MTSPDAPPSF EMERIKQEIA DSFDEELEME IDESRLEAML GELAEHPEQE QLDRRLYFRE LFRLQHELVR LQDWVQHSGL KVLVIFEGRD SAGKGGVIKR ITQRLNPRVC RVVALPAPNE RERTQWYFQR YTAHLPAAGE IVLFDRSWYN RAGVERVMGF CTEDEVEEFF RSVPAFERML VRSGIILLKY WFSITDDEQQ FRFNMRIHDP LKQWKLSPMD VESRRRWEDY TRAKEAMLER THIEEAPWWI VEAVDKKRAR LNCIAHLLGR IPYDEAPRPS VVLPARVRHD DYIRHPVPRE MYVPEIY
|
| |