| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0249 |
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| Symbol | |
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| ID | 5196738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 255218 |
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| End bp | 257524 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579789 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001260758 |
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| Protein GI | 148553176 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.513538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0270747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACTG TGTTCCCGAA GCCACGCCCT TGTGGTAATC CGGCCACGAT GGCTGCATAT
GGGCTTGTAT CCAGGCGATG GCGCAGGCGC GCGGTGACGG CGCTGCGGCC ACGGCGCCTG
CTGCCTTTGC TGGAGATATT GGCGCCGCTG GCCGCATTGC TGGTGGTCGC GGTCAGCTAT
CGGGTCGTCA CCGCCAGCGG CAAGCCCGAA ATCCCGATCT CGCCGACCGT CGTGGCGCTG
CTGCTCGGCG CCAACCTGCT GTCGTTCATG GTGCTGATGG TGCTCGCCGC CCGCCGGGTG
GCGCTGCACC GCGCGGCGCG GTCGGGGCTG GGGGGCAAGG CGCGGCTGCA CGTCCGCCTC
GTCGCCTTCT TCTCGCTGAT CGCCACCGCA CCGACGCTGC TGGTGGTGAT CTTCGCGTCG
CTGCTGTTCC AGCTCGGCAC CGAATTCTGG TTCTCCGACA AGGCCACCGT CGTGCTGCGC
AGCTCCGAGC GGGTCGCGCA GGCCTATGTG ACCGAGAGCA AGGAGCGGCT GCTCGGCGAC
ATCCTCGCCA TGTCGGGCGA CCTGCGCAGC GCGCTGTCGG CGACGACGAT CGACGATCCG
CGCTTCGCGC CCTTCTTCGC GCGCCAGGTC GCCTATCGCG GCCTGTCGGA AGCGGCGATC
ATCAGTGTCG ACCGCGCCGG AACGCCGCAG CTCATCGCGC TCGCCAATCT CGACAAGCGG
CCGCTCGACA AGCGCCTGCC GCCCGCGACG CTGCCCTTCC TGGCGGGCGG CCAGCCGCGC
ATCACCGCCG GGGCGGGCGA CCGGATCGAG GGCACGATCC TGCTCGACGC GGCGAGCCGC
ACCTATCTCT ACATCTCGCG CCAGTCGGAC CGGAACGTGC TGGCCCAGGC CGCCCGCGCG
CGATCGGCGC TGGGCGACTA TGTCGCGACC GTCGACCGCG CCCGCGCGCT CCAGCTCCGC
TTCAACATCC TGCTGATGAT CATCGCGCTG GCGATCCTCG GCATCGCCAT CTGGGTGGCG
ATGACGGTGG CCGACCGGCT GGTCCGCCCG GTCAACGACC TCGTCGCCGC CGCGCGCCGG
GTCGCGGCCG GCGATCTCAG CGCGCGCGTG CATATCGATC CGAGCCCCGA CGAGATCGGC
ACGCTCGGCA GCGCCTTCAA CCGCATGACC CGCAAGCTGG GCGAGCAGAC CGGCGCGCTG
GTCGCCGCCA ACAGCCAGCT CGAAAGCCGC AGCGCCTTCA TCGAGGCGGT GCTGTCGGGC
GTGACCGCGG GCGTCATCTC GGTCGACGGC GACCGCCGGA TCACGCTGGT CAATCCCTCG
GCGCGGGCGA TGCTCGCCCT GGAGGAACCG GTCGACGGCC GGCCGCTCGC CGACATCTCG
CCCGAGCTGC ACCATATCCT CGACGCCGGC GACCGCGAGG CGGTGGTCCA GATCGTCATC
GCCGGCGAGC CGCGCACCCT GTCGGTGCGC GCGGTCGCGG CGGAGGGCGC GCGGGTGCTG
ACCTTCGACG ACATCACCCA GCGCCTCGCC GACCAGCGCC GCGCCGCCTG GGCCGACGTC
GCCCGCCGCA TCGCGCACGA GATCAAGAAC CCGCTGACCC CGATCCAGCT CGCCGCCGAA
CGGCTCCAGC GCCGCTACGG CAAGGAAATC CAGTCCGATC CGGGCGTGTT CGAGCGGCTG
ACCGCGACGA TCGTCCGCCA GGTCGGCGAC ATGCGGCGGA TCGTCGACGA ATTCTCGTCC
TTCGCGCGCA TGCCCAAGCC GGCCTTCCGC GAGGAGGCGA TCGTCGACAT CGCGCGGCAG
GCGATGTTCC TGCAGGAGGT CGCCCATCCG GCGATCAGCT TCAGCCTCGA CAGCGAGGGG
CTGACCCCGA CGATGATCTG CGACCGCCGC CAGCTCGGCC AGGCGCTGAC CAACCTCGTC
AAGAACGCGG TCGAGGCGAT CGAGGAGAAC CCCGCGCAGC ACGCCCCGGG CGTGATCGCG
ATGACGATCC GCATCGCCGA GCGGCGGCTG CGCATCGTGC TGGCCGACAA CGGTCCCGGC
CTGCCGCCCG AGCGCGAGCG GCTGACCGAG CCCTATATGA CGACGCGCAA GCGCGGCACC
GGGCTCGGCC TCGCCATCGT CCGCAAGATC GTCGAGGACC ATCTCGGTAC CTTGGCACTG
CGCGACCGGC CCGGCGGCGG CACCATGGTC GAGATGGATT TCGACCTGGA GGCGCTCGGC
AGCCTCGCCG TCGAGGGCGC GGACCGCGCC GGCAACGCGG CCGAGGAAGC GAAATTCCCC
GAACTCAAGC GAAGTGGAAC TGGTTGA
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| Protein sequence | MLTVFPKPRP CGNPATMAAY GLVSRRWRRR AVTALRPRRL LPLLEILAPL AALLVVAVSY
RVVTASGKPE IPISPTVVAL LLGANLLSFM VLMVLAARRV ALHRAARSGL GGKARLHVRL
VAFFSLIATA PTLLVVIFAS LLFQLGTEFW FSDKATVVLR SSERVAQAYV TESKERLLGD
ILAMSGDLRS ALSATTIDDP RFAPFFARQV AYRGLSEAAI ISVDRAGTPQ LIALANLDKR
PLDKRLPPAT LPFLAGGQPR ITAGAGDRIE GTILLDAASR TYLYISRQSD RNVLAQAARA
RSALGDYVAT VDRARALQLR FNILLMIIAL AILGIAIWVA MTVADRLVRP VNDLVAAARR
VAAGDLSARV HIDPSPDEIG TLGSAFNRMT RKLGEQTGAL VAANSQLESR SAFIEAVLSG
VTAGVISVDG DRRITLVNPS ARAMLALEEP VDGRPLADIS PELHHILDAG DREAVVQIVI
AGEPRTLSVR AVAAEGARVL TFDDITQRLA DQRRAAWADV ARRIAHEIKN PLTPIQLAAE
RLQRRYGKEI QSDPGVFERL TATIVRQVGD MRRIVDEFSS FARMPKPAFR EEAIVDIARQ
AMFLQEVAHP AISFSLDSEG LTPTMICDRR QLGQALTNLV KNAVEAIEEN PAQHAPGVIA
MTIRIAERRL RIVLADNGPG LPPERERLTE PYMTTRKRGT GLGLAIVRKI VEDHLGTLAL
RDRPGGGTMV EMDFDLEALG SLAVEGADRA GNAAEEAKFP ELKRSGTG
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