Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0231 |
Symbol | |
ID | 5196750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 236817 |
End bp | 238844 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640579771 |
Product | putative adenylate/guanylate cyclase |
Protein accession | YP_001260740 |
Protein GI | 148553158 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0742762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTA GCGGCGAAGG CGTGTCACTG GCGGCGCGTA TCCGGGGTTT CGGTCCGCTC TTGCGCAAGA CGCTGCGGCA GATCGGCGCG ACCCGACTCG TCGTCACCGC GATCTTCCTG ATCCTCGGCC TCGCCTTCGC CCGCTACAGC TGGAACGTGA TGCTGGCGAA GGACGCCGAG CGCGCGCTGT TCGACGTGCG GCTGCTGCTC GCCAGCCCGC GGGTCGAGAC CGATCCGCGC ATCGCGATGG TGACCTTCAC CGAGGACACG CTGCGCCTGA CCGGCCGCCG CTCGCCGCTC GACCGCTCGA TGCTGGCCAA GGGACTGCTC GCGCTCGACC GGATGAAGCC GAAGGCGATC GGCATCGATA TCCTCGTCGA TCAGCCGACG CCCGAGGACC AGATATTGAT CGACGCCTTC CGGACGATGA AGACGCCGAC CTATCTGGGC TTCGCGTCGC ATGCGACCAA CACGACCTTC ATGACGCTCG ACCAGGAGAA TTTCCTCCGC GACTTCCTGC GGCAGACCAA ACCCGGCAAC GTCCACCCGA CGAGCATCCG CCTGCTCGCC GACGACGACG GGGTGATGCG GAGCTGGCCG AACCAGCCGC GCGAGCTGCC GCCGCTGATG GCGAACTCGC TGACCGGCGG CGGCGAGCAG TTCCGGTCCT ACCAGGGATC GATCCGCTAC CGGCTGCCGA AGTTCGCCGA CCGGCCGGTG TTCGACAAAT TCCCGATCGA GATCATCGCC AATCCCGACC TGATCGAGGC GTTCCGCCCG CAGATCGAGG GGCGCTACAT CATGATCGGC GGCGACATCC CCGACGTCGA CCAGTTCATC ACCCCCGCCT CGCGCATCCA GAAGGGCGAG ACGACGATCG GGCTGGAGAT CCACGCGACG CTGCTCGCGC AGATGCTCGA CAACATCATG CCGCGCAAGA TTCCGGGCTG GGGCCTGTGG CTGATCGCGC TCAGCGTGAT CGCGCTCGGC GCGCTGACGG CGGTGTCGAA CATGAAGATC TGGAAGCTCG GCCTGCTGCT GCTGGTCCAG GCGGGCGCGA TCGCGGCGGT GCCGTTCATC TGGCAGTTCC ACGGCATCGA CACCCAGGGG CTGCCGGTGT TCGGCTGGCT GATCGGCTGG GTCTTCGCCT ATTCGGCGGT CGGCACCGCG GCGCGGGGCA TCGGATCGGA GCAGCGCAAC TTCGCGCAGT CGGCGCTCGG CAAATATCTG CCCGGCGACA TCGCCAAGGA CATCATGAAG AATCCGGAGC GGCTCCAGCT CCACGGCGAG AAGCGCGAGA TCTACGCGCT GTTCAGCGAC CTGGAGGGCT TCACCAAGCT CAGCCACCAG ATCGAGCCGG AGATGGTCGC CTTCCTGCTC AACAAATATC TCGACGTGCT GTCGGAGACG GTGCTCGAAC ATGGCGGCAC GATCGACAAG TTCGTCGGCG ACGCGATCGT CGCCTTCTGG GGCGCGCCGA TCAGCCGCCC CGACGATTGC GAGCGCGCCG TCCGCTGCGC GGTGGCGATG TACGAGGCGG GCGAGCAGTT CCGCCGCGAG GCGCCCGAGG GCGTGCCGCC GATCGGCGTC ACCCGCGTCG GCGTCCATTT CGGCGAGGCG ATCGTCGGCA ATTTCGGCGG CGAGGGCCGC ATCCAGTACA CCGCGCTCGG CGACTCGATG AACACCGCGT CGCGGCTCGA GGGCGCCAAC AAATATCTCA AGACCAAGAC GCTGGTCAGC GACACGGTGG TCGAGCGCTC GGCGCTGAGC TGTTTCCGGC CGGTCGGGCG GATCGCCGTG TCGGGCCGGT CGACCCCGAT GGAAGTGTTC GAACCCGTCT TCGATTTTTC CGAAACCGCT GTGCAACAGT TCACAGACAT CTTCCGTAGA TATGATGCAG GAGATGAAGG TGCGTTGGCC GAGTTCGAAA AGATGGCCAC AGAAAATCCT GATGATAAGG CGCTCGCCAA TCTGATAGAG CGTCTTCGTG AGGTTGGACC GGGAGGTTAT AGTGCTCTGG ACAAATAA
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Protein sequence | MAGSGEGVSL AARIRGFGPL LRKTLRQIGA TRLVVTAIFL ILGLAFARYS WNVMLAKDAE RALFDVRLLL ASPRVETDPR IAMVTFTEDT LRLTGRRSPL DRSMLAKGLL ALDRMKPKAI GIDILVDQPT PEDQILIDAF RTMKTPTYLG FASHATNTTF MTLDQENFLR DFLRQTKPGN VHPTSIRLLA DDDGVMRSWP NQPRELPPLM ANSLTGGGEQ FRSYQGSIRY RLPKFADRPV FDKFPIEIIA NPDLIEAFRP QIEGRYIMIG GDIPDVDQFI TPASRIQKGE TTIGLEIHAT LLAQMLDNIM PRKIPGWGLW LIALSVIALG ALTAVSNMKI WKLGLLLLVQ AGAIAAVPFI WQFHGIDTQG LPVFGWLIGW VFAYSAVGTA ARGIGSEQRN FAQSALGKYL PGDIAKDIMK NPERLQLHGE KREIYALFSD LEGFTKLSHQ IEPEMVAFLL NKYLDVLSET VLEHGGTIDK FVGDAIVAFW GAPISRPDDC ERAVRCAVAM YEAGEQFRRE APEGVPPIGV TRVGVHFGEA IVGNFGGEGR IQYTALGDSM NTASRLEGAN KYLKTKTLVS DTVVERSALS CFRPVGRIAV SGRSTPMEVF EPVFDFSETA VQQFTDIFRR YDAGDEGALA EFEKMATENP DDKALANLIE RLREVGPGGY SALDK
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