| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0213 |
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| Symbol | |
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| ID | 5196414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 211096 |
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| End bp | 212727 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579753 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_001260722 |
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| Protein GI | 148553140 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.878749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACGT CTGTCGGTTC GTCCATCCTG ACCGCGCTCG GCGCGTCGAG CATCGACACC
AGTTCGCTGG TCGACCAGCT CGCCACCGCC GCGATCGCCA ACAAGACCAA GGCGCTGACC
GACCGCGAGA CCGCGAACAC CGCGAAGATC TCCGACCTCG CCAATGCGGT GAATTCGATC
ACCACCTTCT CCTCGTCGCT GTCCTCGCTG ATCTCGGGCG GCTCGCTGTT CACCCAGCCG
ACCAGCTCGA ACAGCTCGAT CGTCAACGTC AGCGCGGTCG CGGGGTCGCG GCTCAGCGGC
CTGTCCTCGA CGATCAAGGT CGAGCGGATC GCCAGCGCCC AGACGCTGAC CGCCGCAGCC
CTGCCCGGCG CGGCGAGCCC GGTCGGCCTC GGCACGATGG AACTGACCGT CGGCGACAAG
ACCAAGACGA TCACCATCAC CTCCGCCAAC AACTCGCTCG CCGGCCTCGC GCAGGCGATC
AAGGACAGCG GCCTCGGCGT CACCGCCAGC ATCGTCACCG ATTCGACCGG CGCGCGCCTG
GTCGTGAAGG GCGCGACCGG CGAGGCGAAC GCCTTCTCGC TCAAGGTGAC GAGCGGCACC
ACTGGCGAGC TCGACCGCTT CGCCTTCGAT CCCGCCACCT ACGATCCCGA CGCCGTCACC
GGCCTGACGC TTCAGCAGCA GGCGCAGGAC GCGCAGATCG TCGTCGACGG CGTCACCGTC
AACAAGGCGA GCAACAGCTT CAGCGACGTC ATCCCCGGCG TGAAGATCGA CCTCGTCTCG
GCCTCGCCGG GCACGACCGT GTCGATCGGA TCGAGCCAGC CGGTCGATTC GATCAAGCAG
GCCGTCAGCG ACTTCGTCGC CGCCTATAAC GAGATGAAGG CGACGCTCAC CGCGATGACC
GGCACCGAAG GGTCGCTGCG CAGCGACGCC GGCATCCGCG CGCTCGTCAC CAAGCTCGGC
GGACTCACCT CGACCCGGCT CACCTATGCC AGCGACGGCA GCCCGACGAC GCTGGCCGAG
ATCGGCGTGT CGACCAACCG CGACGGCACG CTCTCGCTCG ACAGCGCCAA GCTGTCCTCG
GTGATGGCGA GCAACCCGGC CGCGGTCGAG GCGATGTTCA ACCCCGGCCA GCGCAGCGAC
AATCCGCTGA TCCAGATCAC CAATGCGGTC GGCCAGGTGA AGGGCGGCGT CTACACCGTC
ACCAACGCCA CCCCGGGCGG CTCCGGCAGC ACCGCGCAGG CGACGCTCGA CGGCGGCTAT
ACGCTGCCGC TCGGCGCCAC CGGCGTCCAG GCGTCGTTCA CCTCGGCGGC CGCCGGCCTG
TCGTTCGACG TGCTCGGCCC GGTCGCCAGC GCGACGATCA CCATCGACCT CGGCCTGCAA
GGCGCGCTCG ATGCGATCAA GAACGAGCTG ACCGCCTCGT CCGGCCAGCT CACCGCCTCG
CAGACCCGGC TCGACAACGA GAAGAAGTCG ATCTCCGACG ACAAGGACAA GCTGACCGCC
CGCGACACCG CCTACCGCGC CCAGCTCACC GCCCAATATA CCCGCATGCA GGGCGCGCTG
TCCGCCTTCT CGTCGACGCA GAGCTATCTG AGCCAGCAGA TCAAGCTCTG GACCAACGAC
AGCAGCAGCT AA
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| Protein sequence | MVTSVGSSIL TALGASSIDT SSLVDQLATA AIANKTKALT DRETANTAKI SDLANAVNSI
TTFSSSLSSL ISGGSLFTQP TSSNSSIVNV SAVAGSRLSG LSSTIKVERI ASAQTLTAAA
LPGAASPVGL GTMELTVGDK TKTITITSAN NSLAGLAQAI KDSGLGVTAS IVTDSTGARL
VVKGATGEAN AFSLKVTSGT TGELDRFAFD PATYDPDAVT GLTLQQQAQD AQIVVDGVTV
NKASNSFSDV IPGVKIDLVS ASPGTTVSIG SSQPVDSIKQ AVSDFVAAYN EMKATLTAMT
GTEGSLRSDA GIRALVTKLG GLTSTRLTYA SDGSPTTLAE IGVSTNRDGT LSLDSAKLSS
VMASNPAAVE AMFNPGQRSD NPLIQITNAV GQVKGGVYTV TNATPGGSGS TAQATLDGGY
TLPLGATGVQ ASFTSAAAGL SFDVLGPVAS ATITIDLGLQ GALDAIKNEL TASSGQLTAS
QTRLDNEKKS ISDDKDKLTA RDTAYRAQLT AQYTRMQGAL SAFSSTQSYL SQQIKLWTND
SSS
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