Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0191 |
Symbol | |
ID | 5200072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 181212 |
End bp | 182258 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579730 |
Product | hypothetical protein |
Protein accession | YP_001260700 |
Protein GI | 148553118 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.271456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGTG CCGCATCCGA TCTCTCGCGC AAGCTCGCGC GCAATGCCGA AGATGTCTGC CGGCACTATC TCCGCGCCGG CCGTCGTGTC GGCAATTACT GGATCGTCGG CGATGCGCTG GGTTCACCCG GCCGCAGTCT CTATGTCCGC CTGGACGGCC CCGAATATGG CAAGGGCGCG GCGGGCAAAT GGACCGACGC CGCAACCGGC GAGCATGGCG ATCTTCTCGA CCTGATCGGG CTCAACCGCG GCCATGTTGG CTTCACCGAA ACCCTGGACG AAGCGCGCTC GTTCCTATCG GTGCCGAAGC CGGCATTGGA CTACGACCCG AATGAACCGC GCGCACCGCG CGGATCGTGC AGGGCGGCCC GTCGTCTGTT CGCTGCGTCA CGGCCGATCG CCGGCACCCT CGCCGAATCC TATCTGCGCA CTCGCGGAAT TACCGGTGTG CGGACCGAAC GTTGGCTGCG ATTCCATCCG CGCTGCTGGT ATCGTGCCGA TGTCGATGAT GCACCGGGCA CGCCGTCATC CTTCCCGGCC CTCGTTTCCG CGGTCACCGA CAATGACGGC CAGATCACGG GTGTGCATCG CACATGGCTC AATGCGGCCA CATGCAAGAA GGCTGACATC GTCACCCCAC GCCGGGCAAT GGGCGACCTG CTCGGGCACG GCGTGCGATT CGGCACGGCG AAGCCGGTCA TGGCCGCCGG CGAGGGCCTC GAGACCATCC TGTCATTGCG CATGCCCTTG CCGGCATTGC CGATGATCGC TTGCCTGTCG TCGACCCACC TCGCCGCCAT CGTCTGGCCG AAGCCGCTTC GCCGACTCTA TGTCGTGCGC GATGCCGATG GGGCGGGCAC GAGTGCCTGG GGCACGCTCG TCGAGCGTGG CGCCGGCAAC GGCATCGAGA TCCTCCCGCT CGTTCCGCCG ACCGGCATCG ACTTCAACGA TGCCCTGCTC ACGCTGGGCC GAGAGGCGCT CGCCGCGGCG ATCAAACGAC AGCTGGTTCC AGACGACGCC GACCGCTTCC TCATGTCGGC CGCATAA
|
Protein sequence | MSSAASDLSR KLARNAEDVC RHYLRAGRRV GNYWIVGDAL GSPGRSLYVR LDGPEYGKGA AGKWTDAATG EHGDLLDLIG LNRGHVGFTE TLDEARSFLS VPKPALDYDP NEPRAPRGSC RAARRLFAAS RPIAGTLAES YLRTRGITGV RTERWLRFHP RCWYRADVDD APGTPSSFPA LVSAVTDNDG QITGVHRTWL NAATCKKADI VTPRRAMGDL LGHGVRFGTA KPVMAAGEGL ETILSLRMPL PALPMIACLS STHLAAIVWP KPLRRLYVVR DADGAGTSAW GTLVERGAGN GIEILPLVPP TGIDFNDALL TLGREALAAA IKRQLVPDDA DRFLMSAA
|
| |