Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0128 |
Symbol | |
ID | 5198405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 124542 |
End bp | 125537 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640579667 |
Product | quinone oxidoreductase putative, PIG3 |
Protein accession | YP_001260638 |
Protein GI | 148553056 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.180561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA TTCCCGAATG GATGACCGCG ATCGACCCCG AGGAGAAGGG CGGTCCCGAG ATATTGCGGC CGGTGCGCCG TCCGGTCCCC GGGCCGGGCC CCGGCCAGGT GCTGATCCGA GTCGCCGCGG CGGGGGTCAA CCGCCCCGAC GTCGCCCAGC GCAACGGCGC TTATCCGCCG CCGCCGGGCG CGCCGTCGAT CCTCGGGCTC GAGGTCGCCG GCGAGGTCGT GGCGCTGGGG GAGGGGGCAT TGCCCGAGCT GCTCGGCCAG CCGGTCTGCG CGCTCGTCGC GGGCGGCGGC TATGCCGATT ATGTCGCGGC GGAGGCGGGG CTGTGCCTGT CGGTGCCGAA CACGCTGTCG ATGGTCGAGG CGGCGGCGAT CCCCGAGACC TTGTTCACCG TGTGGAGCAA CGTCTACGAG CGCGCCTATG CCGCCGACGG CGACCGGCTG CTCGTCCATG GCGGGACCAG CGGGATCGGC ACCATGGCGA TCCTGCTCGG CCGCATCTTC CAGGTCGAGA CGATCGTCAC CGCCGGATCG GACGAGAAAT GCGCCGCCGC GATCAAGCTG GGCGCCGCCC ATGCGATCAA CTATCGCAGC CAGGACTATG TCGCGGAAGT GGCGCGGATC ACCGGGGGCA AGGGGGTCGA CATCGTCCTC GACATGGTCG GCGGGGCCTA TGTGCCGCGC AACCTCGATT GCCTGGCGGA GGACGGCCGC CACGTCTCGA TCGCGGTGCT CGGCGGCGCC AAGGCCGAGA TCCCGATCTG GAAGATCATG CAGAAGCGGC TGACCCTGAC CGGATCGACG CTGCGGCCGC GCAGCGTCGC TTTCAAGACG GCGGTTGCCG ACGAGATCGC CTCGGTCGTC TGGCCGCATG TCGAGGAGGG GCGGCTCAAG CCCGTGATCG ACGCGACCTT CCCGCTCGCC CAGGCGGCCG ACGCGCATCG CCGCCTGGAC GAGGATCATG TCGGGAAGGT CGTGCTCGTC AACTGA
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Protein sequence | MAEIPEWMTA IDPEEKGGPE ILRPVRRPVP GPGPGQVLIR VAAAGVNRPD VAQRNGAYPP PPGAPSILGL EVAGEVVALG EGALPELLGQ PVCALVAGGG YADYVAAEAG LCLSVPNTLS MVEAAAIPET LFTVWSNVYE RAYAADGDRL LVHGGTSGIG TMAILLGRIF QVETIVTAGS DEKCAAAIKL GAAHAINYRS QDYVAEVARI TGGKGVDIVL DMVGGAYVPR NLDCLAEDGR HVSIAVLGGA KAEIPIWKIM QKRLTLTGST LRPRSVAFKT AVADEIASVV WPHVEEGRLK PVIDATFPLA QAADAHRRLD EDHVGKVVLV N
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