Gene Swit_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0104 
Symbol 
ID5198446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp98532 
End bp99341 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID640579643 
Productferredoxin--NADP(+) reductase 
Protein accessionYP_001260614 
Protein GI148553032 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.459538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC GTACGGAAGC GGTGAAGATC GCCCCGAACG ACGCCTTCAA CATCCAGACG 
GTCCTCTGGG TGAAGCATTG GAACGAGCAT CTGTTCAGCT TCGCGGTCGA TCGTCCGGCG
TCGCTGCGGT TCCGCTCGGG CGAATTCGTG ATGATCGGCC TGCCGACCGA GGCGCGCCCG
CTGCTGCGCG CCTATTCGAT CGCCAGCCCC TCCTATTCGG ACGAGCTGGA ATTCCTGTCG
ATCGCGGTCG AGGACGGCCC GCTGACCTCG CGCCTGCGCC ACATCATCGC GGGCGACGAG
ATCTATCTCG CCCGCAAGAC CACCGGCACG CTGGTCGCCG ACGCGCTGAC CCCGGGCAAG
CGGCTGTTCC TGCTCGCCAC CGGCACCGGC CTCGCGCCCT TCCTGTCGGT GATGCGCGAT
CCCGACATCT ATGAGCGGTA CGAGCAGGTG GTCATCGTCC ACAGCGTCCG CCACCTCAGC
GACCTCGCCT TCCGCGACCT GCTGGAGAGC CGGCTGGCCG GCGACCCGCT GGTCGAGGAG
GAGGCCGCCG CCAAGTTCCG CTACCTGCCG ATCGTGACGC GCGAGCCTTT CCCGCGCCAG
CAGCGCATCA CCACGCTGAT GGAGAATGGC GGCCTGTTCG ACGGCATCGA CGGCGAGCCG
AAGCTCGACC CGGCGACCGA CCGCGTCATG ATGTGCGGCA GCATGGACAT GATCCGCGAC
TGCTCGGCGA TCCTCGAGCG GCTCGGCTTC GAGGAAGGCT CGAACGCCAA GCCCGCCGAT
TTCGTCATCG AGAAGGCCTT CGTGGGCTGA
 
Protein sequence
MSSRTEAVKI APNDAFNIQT VLWVKHWNEH LFSFAVDRPA SLRFRSGEFV MIGLPTEARP 
LLRAYSIASP SYSDELEFLS IAVEDGPLTS RLRHIIAGDE IYLARKTTGT LVADALTPGK
RLFLLATGTG LAPFLSVMRD PDIYERYEQV VIVHSVRHLS DLAFRDLLES RLAGDPLVEE
EAAAKFRYLP IVTREPFPRQ QRITTLMENG GLFDGIDGEP KLDPATDRVM MCGSMDMIRD
CSAILERLGF EEGSNAKPAD FVIEKAFVG