Gene Swit_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0088 
SymbolacpP 
ID5200417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp84535 
End bp84771 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content60% 
IMG OID640579627 
Productacyl carrier protein 
Protein accessionYP_001260598 
Protein GI148553016 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCGCCGAGCG CGTTAAGAAG ATCGTTGTCG AGCATCTGGG CGTCGAGGCC 
GAGAAGGTCA CCGAGGAAGC CAGCTTCATC GACGATCTGG GCGCGGACAG CCTCGACATC
GTCGAGCTGG TCATGGCTTT CGAAGAAGAA TTCGGCGTCG AGATTCCCGA CGACGCGGCC
GAGAAGATCG CGACCGTCAA GGACGCCATC AGCTATATCG AGAGCCACAA GGGCTGA
 
Protein sequence
MSETAERVKK IVVEHLGVEA EKVTEEASFI DDLGADSLDI VELVMAFEEE FGVEIPDDAA 
EKIATVKDAI SYIESHKG