| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0076 |
|---|
| Symbol | |
|---|
| ID | 5197127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 72764 |
|---|
| End bp | 73111 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640579616 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001260587 |
|---|
| Protein GI | 148553005 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1725] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC AGGACCGCCC CGTCTATCTC CGCCTTCGCG ACATCATCGC CGAGTCGATC
CTCGACGGCA GCTATGGCGA CGGCGATGCT CTCCCCTCGG TCCGCGCCTT CGCCGCGCAG
CACGGCGCCA ATCCGCTGAC GGCGGCCAAG GCCTATCAGG GCTTCCAGGA CGAGGGCTAT
GTGACGGTCA AGCGCGGCGT CGGCATGTTC GTCGCCGAGG GCGCGACCGA CCGCCTCCGC
CGCGAGGCGC GCAACACCTT CCTGCGCGAC GAATGGCCGC GCGTGGTGGC GAGCATGCGC
CGCCTGCGGA TCGAGCCTGG CGACCTGCTC GAGCGCGTCG GGGGCTGA
|
|---|
| Protein sequence | MSSQDRPVYL RLRDIIAESI LDGSYGDGDA LPSVRAFAAQ HGANPLTAAK AYQGFQDEGY
VTVKRGVGMF VAEGATDRLR REARNTFLRD EWPRVVASMR RLRIEPGDLL ERVGG
|
|---|
| |