Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0063 |
Symbol | |
ID | 5196942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 61351 |
End bp | 61977 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640579602 |
Product | hypothetical protein |
Protein accession | YP_001260574 |
Protein GI | 148552992 |
COG category | [S] Function unknown |
COG ID | [COG5385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.917122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAATC GTTCGGCCGA TTTCGCGAGC CTGCTCTGTT CGCGGTTGTG CCACGACCTT CTGTCGCCGG TGGGAGCGCT CAACAACGGC ATCGAGCTGC TCGCCGACGA GACCGACCCG GAGATGCGCG AACGCTGCAT GGAACTGCTG GCCGAAAGCG CCCAGACCAC CGCGAACCGG CTCAAATTCT ACCGTCTGGC CTTCGGCGCG GCGGGCGGCT TTGGCGAGCG GGTCGACACC CGCGAGGCGC GCGAGGCGAT CGAGGGGTTG CATGGCAACG GCAAGGTCCG GCTCGGCTGG ATGGTCGATG CCCCGACGCT GCCCAAGCCG GCGATCAAGA CCCTGCTCAA CCTCGCGCTG ATCGCAGGCG ACGCGCTGGT CCGCGGCGGC CAGCTCGACA TCGCCGCGGA AGGCGGCGAG GTGGTGATCC GCGCCGAGGG GCCCCGCGTC GTGCTCGATC CCGAGCTGCG CAACGCCCTG CTCGGCCATG CCGATCCCGA CCTGGTCTCG CCGCGCGCCG CCGCCGCCTG GCTGGTCCAT ATCCTGGTCA GCGAACAGGG CGGCGCGGTG CAGGTCTCGC AACCCGAGGA CGGCCTGCTG ATGATCGGCG CGACGCTGCC GGCCTGA
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Protein sequence | MVNRSADFAS LLCSRLCHDL LSPVGALNNG IELLADETDP EMRERCMELL AESAQTTANR LKFYRLAFGA AGGFGERVDT REAREAIEGL HGNGKVRLGW MVDAPTLPKP AIKTLLNLAL IAGDALVRGG QLDIAAEGGE VVIRAEGPRV VLDPELRNAL LGHADPDLVS PRAAAAWLVH ILVSEQGGAV QVSQPEDGLL MIGATLPA
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