Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0055 |
Symbol | |
ID | 5200390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 53421 |
End bp | 55169 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640579594 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001260566 |
Protein GI | 148552984 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0628794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CCTCGACACC CTATCGCGTC CTCGCGCGCA AATATCGGCC GCAGAATTTC AACGAGCTGA TCGGCCAGGA CGCGATGGTG ACGACCCTCG CCAACGCGAT CCGGCGCGGC CGGCTGGCGC ATGCCTTCCT GCTGACCGGC GTGCGCGGCG TCGGCAAGAC CTCGACCGCG CGGCTGATCG CCAAGGCGCT CAACTGCATC GGGCCGGACG GGCAGGGCGG GCCGACGATC GATCCTTGCG GCGTCTGCGA GCCCTGCGTC GCGATCGCCG AGGGGCGGCA TATCGACGTG GTCGAGATGG ACGCCGCCAG CCACACCAGC ATCGACGACG TCCGCGAGAT CATCGAGGCG GTGCGCTATG CGTCGGTGTC GGCGCGCTAC AAGATCTACA TCATCGACGA AGTCCACATG CTGTCGAAGT CGGCCTTCAA CGGCCTGCTC AAGACGCTGG AGGAGCCGCC GGCGCATGTG AAATTCCTGT TCGCCACGAC CGAGGTGAAC AAGGTCCCGA TCACCGTCCT GTCGCGCTGC CAGCGCTTCG ACCTGCGGCG CATCACCGCC GACAAGCTGG CCGCGCACTT CACCAACGTC GTCGCGGCCG AGGGCGTCGA GGCCGATCCC GAGGCGCTGG CGCTGATCGC GCGGGCGGCC GAAGGCTCGG CGCGCGACGG CCTGTCGATC CTCGACCAGG CGATCGCGCA CGGATCGGGC CGGGTCGAGG CGCAGCAGGT TCGCGACATG CTGGGCCTGT CCGATCGTGG CGCGGTCCGC CGCCTGTTCG GCGAGATGCT GAAGGGCGAC GCGGCGGCGG TGCTGGCGAG CATCCGGGGG CAATATGACC TCGGCGTCGA GCCGGTGGCG ATGCTGCACG GGCTGCTTGA GACCTGCCAT GCGATCACCC GCGCCAAGGT GGCCGGGACC GACGATCCCG CGCTGTCGGC CGAGGAGCGC GAGGCCTATG GCGACTGGGC CGGCAAGCTC GGCTTCGCGA CGCTCCACCG GCTGTGGCAG CTCCTGCTCA AGGGCCATGG CGAGGTCCAG ACCGCCGCCA TGCCGATCGA GGCGGCCGAG ATGGCGCTGC TCCGCGTCGT CCATGCCAGC CAGCTTCCCG ATCCGGGCGA GCTGGCGCGC CGGCTCGCCT CGGGCGACCT GAACCTGCCC GTCCAGCCCG CGCCCGCCCA GCCGCCGGCG GCCGAGCCGC AGGGGGCGCT GATGGCCGCG CCGGCGCCCA TTGCCGCTCC TGCGCCTGCG CCCGCCCCGA TCGAGACGCC GCCGCCGCTG GCCGCCGTGC CGGCCCCGGC CCCGGTCGTC GCTCCGGTTC CGGTCGCGAT CCCCGAGCCC GAGCCGGAAC CCGCGCCGCC GTCGCTGCCC GCGACCGGCG AGGCGATCCA TGCGCTGCTG CTGCCGGAAA ACGCGCTGCT CGCGCAGCTC TTCCACGATT ATGCGGCGAT CGTCCGGCTG GAAGGCGAGG AGCTGTTGAT CGCGCGCCAC CAGCGGCTGC CGCAGAATTT CGCCGGCGAC GTCGCCAATA TCCTCAAGCG ATCCACCGGC CGGACCTGGT CGGTCGCTAT GGTCGACGAG GCGGGCGCGC CCTCGCTGCT CGCCCGGATC CGCGCCGAAG AGGACGCGGC GCGCGACGCC ATTCTCGAAT CCCCGCTGGT CAAGGCCGCT CTGGAAGCCT TTCCGGATGC CGAGCTGATC GACTACAGCG CCCCTGAAAA ACGGAGTCTC GCATCATGA
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Protein sequence | MSESSTPYRV LARKYRPQNF NELIGQDAMV TTLANAIRRG RLAHAFLLTG VRGVGKTSTA RLIAKALNCI GPDGQGGPTI DPCGVCEPCV AIAEGRHIDV VEMDAASHTS IDDVREIIEA VRYASVSARY KIYIIDEVHM LSKSAFNGLL KTLEEPPAHV KFLFATTEVN KVPITVLSRC QRFDLRRITA DKLAAHFTNV VAAEGVEADP EALALIARAA EGSARDGLSI LDQAIAHGSG RVEAQQVRDM LGLSDRGAVR RLFGEMLKGD AAAVLASIRG QYDLGVEPVA MLHGLLETCH AITRAKVAGT DDPALSAEER EAYGDWAGKL GFATLHRLWQ LLLKGHGEVQ TAAMPIEAAE MALLRVVHAS QLPDPGELAR RLASGDLNLP VQPAPAQPPA AEPQGALMAA PAPIAAPAPA PAPIETPPPL AAVPAPAPVV APVPVAIPEP EPEPAPPSLP ATGEAIHALL LPENALLAQL FHDYAAIVRL EGEELLIARH QRLPQNFAGD VANILKRSTG RTWSVAMVDE AGAPSLLARI RAEEDAARDA ILESPLVKAA LEAFPDAELI DYSAPEKRSL AS
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