| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0029 |
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| Symbol | |
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| ID | 5200448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 28114 |
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| End bp | 29760 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579566 |
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| Product | peptidase M28 |
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| Protein accession | YP_001260540 |
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| Protein GI | 148552958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.204643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.983563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA TCGCAGCCCT GCTCGCAGCC CCGCTGCTGC TCGCCCCCGC CCTCTGCCTC
GCCGCCCCCA CCCCTGCCTT CGACGTCCAG CGCTTCAGCC AGGACGTGAA GACGCTGTCC
GACGACAGCT TCGAGGGCCG CGCGCCCGCG ACCGAGGGCG AGAAGAAGAC GATCGCCTAC
ATCATCCAGC AGATGAAGGC CGCCGGCCTC CAGCCCGGCA TGCCCGATGG CGGCTGGACG
CAGAGCGTGC CGCTGCTCAA GTCCGACATC GTCGGCGCGC CGAAGCTGTC GCTCAGGCTG
GGCGACGGCG CCGCCCGCGC GCTGACCCAG GGCGAGGAGA TCGCCGTCCG CGCCGCGCTG
ACCGGGCAGG ACAAGGTCGA CATCGCCGCC GCCCCGCTGG TCTTCGTCGG CTATGGCGTC
AAGGCGCCCG AACGGAACTG GGACGACTTC AAGGGCGCCG ACCTCAAGGG CAAGATCCTC
GTCGTCCTCG TCAACGATCC CGATTTCGAG GGTGGAGAGG GCGATTTCGG CGGCAAGACC
ATGACCTATT ATGGCCGCTG GACCTACAAA TATGAGGAAG GCGCGCGGCA GGGCGCGGCC
GGCGTGCTGG TGATCCACGA ATATGCGCCG GCCTCCTACG GCTGGCCGAC GGTCAAGAAC
TCGAACACCA ACACGATGTT CGACATCGTC CGCGCCGATC CCACGGCCGA GCATGTCCCG
ATGGAGGGCT GGATCCAGCG CGACCTGGCG GTCGACCTGT TCAAGGCGGC GGGCCTCGAT
TTCGAGGCGA TGAAGAAGGC CGCGCAGAGG AAGGACTTCA AGCCCGTCGC GCTCAACGCC
ACGCTCGACG CCGCCTATGC GGTGAAGGCG GAGACGATCA CCTCCTACAA CGTCCTCGGC
CGCCTCGCCG GGGCGAAGCA TCCGAACGAG ACGGTGATCT ATTCGGGCCA TTGGGACCAT
CTCGGCATCG GCCAGCCCGA CGCGAAGGGC GACCGCATCT ACAACGGCGC GCGCGACAAC
GCCTCGGGCA TCGCCGCGCT GCTCGAACTG GGCCGCGCCT TCGCCAAGGC GCCGCGCACC
GACCGATCGG TCCTGTTCCT CGCCGTGACC GCCGAGGAGA AGGGCCTGCT CGGCTCCGAA
TATTATGCCG CCAACCCGGT CTATCCGCTC GCCACCACCA CCGGGGTGAT CAACATGGAC
AGCATCGTCG GCGAAGGCGC GGCCAGGGAC TTCACCATCT CCGGCGTCGC CAGGCTCGGC
CTGCTCGACA TGCTGGTCGA CCAGGGCAGG AAGCTCGGCC GCGTCTACGT GCCCGATCCC
AAGACCGAGA CGGGCGGCTT CTACCGTTCC GACCATTTCC CGATGGCGAA GGCCGGGGTG
CCCGCCTTCT CGTTCAAGGG CGGCATCGAC CTGGTCAAGG GCGGCGTCGC GCGCGGCAAG
GAACTGGGCG CGATCTACAC GCGCGACCGC TACCACCAGC CCGCCGACGA GTGGAGCGCC
GACATGGACC TGTCCAACAT CGGGCCGGAC CTGACCTTGC TCTACAATAC CGGCCGCGCG
CTCGCCGACA GCCGCGCCTG GCCCGACTGG GCGCCCGACG CCGAGTTCAA GGCGAAGCGC
GACGAGACGG CGGCGGAGCG GAAATAA
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| Protein sequence | MRKIAALLAA PLLLAPALCL AAPTPAFDVQ RFSQDVKTLS DDSFEGRAPA TEGEKKTIAY
IIQQMKAAGL QPGMPDGGWT QSVPLLKSDI VGAPKLSLRL GDGAARALTQ GEEIAVRAAL
TGQDKVDIAA APLVFVGYGV KAPERNWDDF KGADLKGKIL VVLVNDPDFE GGEGDFGGKT
MTYYGRWTYK YEEGARQGAA GVLVIHEYAP ASYGWPTVKN SNTNTMFDIV RADPTAEHVP
MEGWIQRDLA VDLFKAAGLD FEAMKKAAQR KDFKPVALNA TLDAAYAVKA ETITSYNVLG
RLAGAKHPNE TVIYSGHWDH LGIGQPDAKG DRIYNGARDN ASGIAALLEL GRAFAKAPRT
DRSVLFLAVT AEEKGLLGSE YYAANPVYPL ATTTGVINMD SIVGEGAARD FTISGVARLG
LLDMLVDQGR KLGRVYVPDP KTETGGFYRS DHFPMAKAGV PAFSFKGGID LVKGGVARGK
ELGAIYTRDR YHQPADEWSA DMDLSNIGPD LTLLYNTGRA LADSRAWPDW APDAEFKAKR
DETAAERK
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