Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_39590 |
Symbol | |
ID | 8389280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4284397 |
End bp | 4286325 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977968 |
Product | hypothetical protein |
Protein accession | YP_003135727 |
Protein GI | 257057895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.455624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCACA GAGTCGAGGT GGCCGACCGG CCCGATGCGC TGTACGCCCT GTGGGACGGC CGGATCTTCC AAGCGAACCC GAGTGCCGAC GGCAGCGTCC TGCTCGTCGT CCCCGAAGGT GAGGAGGCCC CTGAAGGCTT CGACACCACC TTCGACGACA GGCCCGCGAA GGCGGTGCCG GCGCAGGAGG CCTCGGCGGG CCTGGCCACC TTCGCCGTCC ACACCTACTG CCTGTACGAC GACGAGCCCT ATCGCATCGA ACCGAGTTCG GACGAGGCCG AGCTGACCCT GCGCTGGACC GGCACCGACG AACGGCTCGC CGCGGAGTTG GGGTTGGTCG ACTTCAGCAC CACCACCGAC GACCCGGAGT CGCTGACCGC GCTGTGGCAG GAACGTCACG ACTTCGCCGA CGAGAACATG CCTCGCAGCG AACCGGGCAG TGGTGACGTA CAGGTGTTGC TGCGGGCGAT CGGGCGCACG TTGCGCGGGT TCCTCCCCTC CGGCTGGCAG CGGGTCGCCG CACAGTTCCG GCAGGTGGGT GACTACTCCG AACTCGAGGT CAGGGCGGTG GCAGGCGACG TCGTCGTGGC ACTGTCGGCG CCCCCGCATC TCGGGCAGCT GTTCACGCAG TTGCGTTCGG CCATGTACTC CGCCGAGGAG GGCACCTGGT TCCAGGGCAC GTTCACCCTC GACTCCGAGG CCAATTTCGA CTTCGACTAC GACACCGAGC ACGAACCGTC GTGGCGATTG GCCCCCGAGG GCCGCGTGAC GGTTCCGAGT TACGAGGTCG AGCTGCGGTA CTTCCCCCGG AAACGAGTGC CGCGTTGGCT CTCCGCCAAG GCGGGGCTTC CGTTGGACGT GCAGTTCCGG CAGGCGAAGG TGGTCGACGC GCACGCGCCG GGTGAGAAGC CCGTGGTCAA TCGCCCACCG GTGCCGCAGG AGATGGTCCG CGACATCCTG AACTATCTCT ACCGGGCTCC CGTCGTGCAC ACCAAGCCCG GCGCTCTGCC CGACATCTTC GTGCCGGGCC CGCCCAACGT GCCCGACGCC TTCCACACCG ACGGCACCTG GATCTGGCCC GCCGCCGTAC CGCACTATCT GCGCAAGTAC GGCGTGCCAC CCGAAGCCGG TCTGTTGGAG CACATCAAGG CCAACAACTT CCGGGTGCCC TACGTCGACC CGCAGCTGCG TGCCACCGCC CAGGCGGATA TCCTGGGCGC CCCTCGGCCG CCGCAAACGG TCGACGACGC GGGGGAACTC GATCCGGTGT CCAGGGTGGA GCGGGGCGAG GAACCGGAAC GGCCGTTGCG GGCATCCGAG GTGCTGCGCA CGCTACGCGC CCGACTGGCC GAACACGGTG TGGCCGCAAG CGCTTACCGC ATCGGTGAGA TCGCCGACGG GGCGTGGTGT CTGCATCGCA CGCCGCAAGG CTGGGAGGTC GCCCGCTATG TCGAGGGCCG CCCCGTCGAG CCGCGGTATT TCCAGCGGGT CCAGCCCGCC GCCGAAGCGC TGTTGGGTGC GTTGCTGTTC TTCCCCGGCC GAGCACGCGC CGGCGTGGAC GAGGAGGCCG AGGCACAGGA GCCGCCGGCC CACGCCACCG ACTGGCCGAT CCTGCCGTTG CGTGGTGAGC CGCCGTTGCC TCTCTACAGG GGCAAACGTT TGCTCACGCT GTCCGCGGGC ACGGTGGTGG ATCGTTACGG CAATGAGGCG GGCAACCTCG TGCACCCGCA GGACACCGCG TTCACGGAGA CCTCGTTGCC GCTCGAGCGC GAGCTCGAAC GGCACCGTTA CCGGGTGGTT CGGCCCATCC GGGTACTCAG CGGTGTGCTG CGCCCCTGGG GGCCGCTACG CGGCGGGGGC GTGGGATACC TGCTGCCGCG GGCGATCGGG CATCACCTGG AAAGCGGTGC GCTCGAGCGG CTGTCCTGA
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Protein sequence | MRHRVEVADR PDALYALWDG RIFQANPSAD GSVLLVVPEG EEAPEGFDTT FDDRPAKAVP AQEASAGLAT FAVHTYCLYD DEPYRIEPSS DEAELTLRWT GTDERLAAEL GLVDFSTTTD DPESLTALWQ ERHDFADENM PRSEPGSGDV QVLLRAIGRT LRGFLPSGWQ RVAAQFRQVG DYSELEVRAV AGDVVVALSA PPHLGQLFTQ LRSAMYSAEE GTWFQGTFTL DSEANFDFDY DTEHEPSWRL APEGRVTVPS YEVELRYFPR KRVPRWLSAK AGLPLDVQFR QAKVVDAHAP GEKPVVNRPP VPQEMVRDIL NYLYRAPVVH TKPGALPDIF VPGPPNVPDA FHTDGTWIWP AAVPHYLRKY GVPPEAGLLE HIKANNFRVP YVDPQLRATA QADILGAPRP PQTVDDAGEL DPVSRVERGE EPERPLRASE VLRTLRARLA EHGVAASAYR IGEIADGAWC LHRTPQGWEV ARYVEGRPVE PRYFQRVQPA AEALLGALLF FPGRARAGVD EEAEAQEPPA HATDWPILPL RGEPPLPLYR GKRLLTLSAG TVVDRYGNEA GNLVHPQDTA FTETSLPLER ELERHRYRVV RPIRVLSGVL RPWGPLRGGG VGYLLPRAIG HHLESGALER LS
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