| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_39100 |
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| Symbol | |
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| ID | 8389231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4231717 |
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| End bp | 4233570 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977920 |
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| Product | GTPase of unknown function |
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| Protein accession | YP_003135679 |
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| Protein GI | 257057847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000974304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.356305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGG CACCTTCGAT CGGCAAGCCG AGCCTGCCCG CACAGGTGAA AAAGGCGCGT
GAATCGCTAC TGGCGCTGTT GCGGGACCTC GACGCCCAGG CGGCGAAGTG GGTCGAGGAG
CAGCGTGGTG CGAAGACGAC CAAACCGTCG GTCGTCGTGG TCGGGGAGAC GAATCGGGGG
AAGAGTTCCC TGGTCAACGC GCTGTTGGCC AAGCCGGGGC TGTCGCCTGT CGAAGCGGAG
GTGGCCACGG CGACCTACCT GGTGTTCGAC CACGCGGAGG AGTGGCGGGC GCAGGCGTGT
TACCCGGGTC AGCTGGCGCC GGTGGAGTTC GGGCTGGAGG AGCTCGAACG CTGGGTGAGT
GTGCGGCACG ATCTCCCCGA GGGACAACTG CCCCCGCGCT ATGTCGAGGT GAGCGGCCCG
GTGCCGCTTC TGGAGCGCAT CAGCGTGGTG GACACCCCGG GGGTGGGCGG GCTGGATTCC
GCGCACGGTG AGCTGGCGAT GGAGGCCGCG GCCGGGGCGA CCGCGCTGCT GTTCGTGGTG
GACGCCTCGG CCCCGTTCAC CATGCCGGAG CTGCGTTTTC TGACGATGTT GGCCGACCGC
GTCGAGACGG TGGTGTTCGC GCTGTCGAAG ACCGACCAGT TCCGTGGTTG GCGGCAGATC
CTGGAGGCTA ACAAGCGGTT GCTGGCCGAA CACGCGCCGC GGTTCGCCGA CTGTCCGTTC
CACCCGGTCT CCGCGCGGAT GTTCGAGCTG GCCGCCAAGG CGCCCAACGA GCAGGCCGCC
GCCATGCTGC GCGAGAAGTC GGGTGTGGCC GAGCTGCAGA CGGCGTTGCA AGAGCTGCTG
GTGGGCCGCG CGGCGATGTT GGGTGAGGCC AACACCCTGC GTGCGTTGTC GAGCGCGTTG
GCCGAGCAGC GGGTGAAGTT GACCGCCAAC GAGCGGGCGC TGCGGTCGGG TGAGTCGGAG
GCACGGCAGC TGAGGGAGCG TCGTGATCAG CTCGTCGCCG ACCGACGTTC GTCCACGCGG
GGTTGGCAGC TGCGGTTGCG CGGTGAGGTG CAGCGGGCCC GGATCGATCT GGGCCACGAG
GTCGGCAGGC AGATGCGGGA GGCGCAGGCG TACTTCCGGC AGCGGATCGA CGCGGCGGGC
CGGGAGGAGC TGGCCGCGCT GCCGCAGCAG GTGGACGCCA CGTTGCAGAC CGTGTCGCAG
CGGGTGTCGG GTCTGCTCAC GCAGCGGTTG AACGAGATCA CCGAAGCGGT GCTGGCCGAG
CTGTTCTCCG CCGAGGAGTT GGCGGTCATC CGGGCACAGC TCGCCCGCGG TGGTGGCCCG
CCGGTGGTGT TGCGTCCGCC CGACAAGCGA CCGCCGACCG CCGAGGACAA GTTGCTGGTG
TTCATGGGGG TCTCCGGCGG TGCGGGCGCG GCCAAGCTGG TCGCGGCACC GTTCGTCAGT
GCCGCCCTGT TCGCGCCCGT GGTGCTGCCG GCCACCATCG TGATCGGTCT CGGGGCGGGC
TGGTGGATGG CCCGTACGCG CAGGCACGCC GCCGACAAAC AGCACGCGAA GCAGTGGCTC
ATCGAGTCGA TCGCCGACGC GCGCTCGACG CTGGATCAGT TGGTGGCGGA GCAGCTCATC
GAGGCCGAGC AGCAACTCGC CCTCGCCCTC GACGACGCGT TGAGCCGGCG GATCGAGGCC
ATCGAGGCGG AGCTGAAGGA GATCGACACC ACCATCAAGT TGGACGAGAA GGAGCGCGCG
AGGAAGCTCA CCCGGGTGTC GAGGCGGATC AAGGAGGTCG AGGAGGGGTT GCGGCAGGCC
GAGGGCTTCC TGGAGCGCAT CAGGGCGTTG CGGGACCGGC CGAGCCAGGG ATGA
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| Protein sequence | MSTAPSIGKP SLPAQVKKAR ESLLALLRDL DAQAAKWVEE QRGAKTTKPS VVVVGETNRG
KSSLVNALLA KPGLSPVEAE VATATYLVFD HAEEWRAQAC YPGQLAPVEF GLEELERWVS
VRHDLPEGQL PPRYVEVSGP VPLLERISVV DTPGVGGLDS AHGELAMEAA AGATALLFVV
DASAPFTMPE LRFLTMLADR VETVVFALSK TDQFRGWRQI LEANKRLLAE HAPRFADCPF
HPVSARMFEL AAKAPNEQAA AMLREKSGVA ELQTALQELL VGRAAMLGEA NTLRALSSAL
AEQRVKLTAN ERALRSGESE ARQLRERRDQ LVADRRSSTR GWQLRLRGEV QRARIDLGHE
VGRQMREAQA YFRQRIDAAG REELAALPQQ VDATLQTVSQ RVSGLLTQRL NEITEAVLAE
LFSAEELAVI RAQLARGGGP PVVLRPPDKR PPTAEDKLLV FMGVSGGAGA AKLVAAPFVS
AALFAPVVLP ATIVIGLGAG WWMARTRRHA ADKQHAKQWL IESIADARST LDQLVAEQLI
EAEQQLALAL DDALSRRIEA IEAELKEIDT TIKLDEKERA RKLTRVSRRI KEVEEGLRQA
EGFLERIRAL RDRPSQG
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