Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38930 |
Symbol | |
ID | 8389214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 4212719 |
End bp | 4214221 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977903 |
Product | hypothetical protein |
Protein accession | YP_003135662 |
Protein GI | 257057830 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.389828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.203227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCGT TCGAGCAACG GGATTACCTG GAACAGGGTG GTGTCCCACC CAAACTGACC AGCGACCAGA TCCAACAGCT TCCGTCAGTC CAAGTGGACG ATTACCTGCG CGCCCGCTAC AACGCCGAGG GAGGCGGGTT GAGTTGGTTC GGCTTCCTGA ACTCGATCAG AGCCGAGCTC GAAGCAGGCG CCATCAACGC AGAGAAATGG AAAGAAATCC ACGACTCGAA CTCCGAATTC AACTACGTCG ACGGCCTGCA ACCGTCTGAT GCCCACTACC CCGGCCACGA ACACGAAAGC CTGAAGAGAT ACGTCAACGA GGAGCTCGAT CCGGCACTCG TTGAGGACAT CTCGAGGGCC TACCACGACC TACACACGGC TTTCAAGGAT TTCACCACCG AACTGAAAGA GGCCATCGGG AAGTCCCAAC AGGAATGGGA GGGTGAGGCA GCCAGCGGCG CTCACGGCTA CTTCGACAGC CTCGCGGGTT GGTCGGAGGC CAACTCGCAC AACGCTGAAC TCGCATCGTC GGTCATGGCA CAGCAGTCCG AGGCCGCCAG TACGGCGAAG AACAGTATGC CCGAGCCCAT CCCCTTCGAT CTGTCGAAGG AGATGGGGAA CTGGTTCTCG AACCCTCTCA ACATCGTCGA TGAGATCTCC CAGACCATTC AAAAGTCGGA GGACAGCCGG GCCGCGCATG AGCAGGCCGC GGAGGTCATG CACCGCTACG ACAACCAGCT GTACGAGGCA GCGTCGAAAC AACCGCTGTT CGCCGAGCCG CCGACGTTCG GTGGGGGCAG TGGCGACAGT GGCACCAAGC CCAGCGAGAC GATTCGGGTT CCGGAGACTT CCACCGACAG CGGTACTACC ACCTCGGGGT TCGTCGACGG TGGTGTGCCC AAAGGATCGG TTCCCTCCAC CACCGGTGGC AATACGGGCT ACACCGGTGG TGGCTCCACC CCGATTCCGC CTGGGGGTGG GCCTTCGACC GGGGCTGGTG TGGTGCCACC GGCGACACGG CCCTCCGGAC TGAACCCCGG CGGCATGACC CGGCCTCCGG CCGGGGGACG CGGTTCCCAG CGCAGTGGGT TCGGACCCGG CAGCATGGGC GCGGTCCCGG CCGCGGGTAT GGCCGGTGGC TTCGGCCCCG GCGGCGCCGG AGGCGGAGGC TACAGCGGCG GCCGGGTGCC GGGAGCTGGG TTCGGCCCCG GCGGCGCCGC CGGGGCTGGC GGTGCTGGAG CCGGACCAGG TGCGGCTACC GGGGCCAGGC CGATGGGCGG TCCGGGCACA GCCGGACCCG GCGCCGCGGC GGCCGCCGGC GCCGGAGCAG CCGGCCGCGG CGGCGCGGGT GCGGCCCCTA TGGGAGCCGG AGCCGGCGCG GGCAAAGGTG GGCGGGGCGG GGAGGACGAC GAGCACCAAC GCCCCACCTA CCTGGTCGAA GCCGACCCTG ACGACATCTT CGGCACCGAC CAGCGCACCG CACCACCGGT CCTCGGCACC TGA
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Protein sequence | MSAFEQRDYL EQGGVPPKLT SDQIQQLPSV QVDDYLRARY NAEGGGLSWF GFLNSIRAEL EAGAINAEKW KEIHDSNSEF NYVDGLQPSD AHYPGHEHES LKRYVNEELD PALVEDISRA YHDLHTAFKD FTTELKEAIG KSQQEWEGEA ASGAHGYFDS LAGWSEANSH NAELASSVMA QQSEAASTAK NSMPEPIPFD LSKEMGNWFS NPLNIVDEIS QTIQKSEDSR AAHEQAAEVM HRYDNQLYEA ASKQPLFAEP PTFGGGSGDS GTKPSETIRV PETSTDSGTT TSGFVDGGVP KGSVPSTTGG NTGYTGGGST PIPPGGGPST GAGVVPPATR PSGLNPGGMT RPPAGGRGSQ RSGFGPGSMG AVPAAGMAGG FGPGGAGGGG YSGGRVPGAG FGPGGAAGAG GAGAGPGAAT GARPMGGPGT AGPGAAAAAG AGAAGRGGAG AAPMGAGAGA GKGGRGGEDD EHQRPTYLVE ADPDDIFGTD QRTAPPVLGT
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