Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_38420 |
Symbol | |
ID | 8389163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 4158966 |
End bp | 4159646 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644977853 |
Product | response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein |
Protein accession | YP_003135613 |
Protein GI | 257057781 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC GGAGCACAGC GCCCGAGACC GTGCGCGTGA TGGTGGTCGA CGACCACGCG ATCGTCCGCC GTGGATTGCG TGCCTATCTG GAGACGGTGC CGGATCTCCG ACTCGTCAGC GAGGCGGCCG ACGGTCAGGA AGCGGTGGAC CTGTTGAACG AACGGCACGT CGTCGGTGAC CCCATGCCGC ACGTCGTGTT GATGGACCTC CAGATGCCGC GGTTGGACGG CATCGAGGCC ACGCGGTCCA TCCTCGCCTC GTACCCCGAT GTGAAAGTCG TCGTGCTCAC CAGCTTCAGC GAGGCCGAAC GCGTACATGC CGCACTCTCG GCGGGCGCGG CGGGGTACGT GCTCAAGGAC GCCGAACCCG AGGAGGTCGC CACAGCGGTC CGGGCGGCCG TGAAGGGCGA GGTGCACCTG GACGCCGCCG TGGCGAGGCT GCTCGCGCGC AGGATGGCGT CACCGCAGGT GGGGGTGACG TCGTTGACGG CGCGGGAACG CGACATCCTC GTCCTCGTGG GGCAGGGACT GTCCAATCGG GAGATCGCCG ACCGGCTGGT GATCAGCGAG CGGACCGCCC GCACCCACGT GAGCAACGTG CTGAGCAAGC TCCAGTTGTC CTCCCGCACC CAGGCCGCGT TGTTGGCCAT CAGGGAAGGC CTCGTCTCCC CGCCCGGCTG A
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Protein sequence | MAERSTAPET VRVMVVDDHA IVRRGLRAYL ETVPDLRLVS EAADGQEAVD LLNERHVVGD PMPHVVLMDL QMPRLDGIEA TRSILASYPD VKVVVLTSFS EAERVHAALS AGAAGYVLKD AEPEEVATAV RAAVKGEVHL DAAVARLLAR RMASPQVGVT SLTARERDIL VLVGQGLSNR EIADRLVISE RTARTHVSNV LSKLQLSSRT QAALLAIREG LVSPPG
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