| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38280 |
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| Symbol | |
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| ID | 8389149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4147792 |
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| End bp | 4148415 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977839 |
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| Product | RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-E family |
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| Protein accession | YP_003135599 |
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| Protein GI | 257057767 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCA GCGCCGAGCC GACACGCCAC CGCAATGCCA CGCGCAGAGT GGAACGCGAC
GTCGAGCAGA CGCTATCCCA CCTGCGCACG TTGGACGCGC CTGTGCAGCG GACCCAACCC
TCGGGGCCGC TCACGCTCGA GGATCTCTAC CGGCAGCATC GAATGCGGTT GGTGCGGCTG
GCGATCCTGC TGGTCGACGA GCCGGCCACG GCCGAGGACG TGGTACAGGA GGCGTTCACG
GGTCTGCACC GCAACTGGGG GAAGCTGCGC GACGCCGCCG CAGCCGTGTC GTATCTGCGG
ACGGCGGTGG TGAACGGCTC GCGTAGCGTG TTGCGCAGAC GTAAGACCGC TCGTGACTAC
GTGCCCCCGC ACGCGGTCAA CGCGAGGTCG GCCGAGAGCC TGGCCATGCT GTCCACCGAG
CATCAGGCCG TCGTACAGGC ACTGTCGAAG CTGCCGCCCC GGCAGCGGGA AGTACTGGTA
CTGCGGTACT ACGGCGGATT GTCCGAGGCG GAGATCTCCG AGGCCGCGGG CATCTCGCGG
GGCACCGTGA AGTCCACGGC GAGCCGCGCC CTGGAGGCGT TGCAGCGGGC GATGAACAAC
GAACGTCGCT CGGCCTCTCG GTGA
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| Protein sequence | MHGSAEPTRH RNATRRVERD VEQTLSHLRT LDAPVQRTQP SGPLTLEDLY RQHRMRLVRL
AILLVDEPAT AEDVVQEAFT GLHRNWGKLR DAAAAVSYLR TAVVNGSRSV LRRRKTARDY
VPPHAVNARS AESLAMLSTE HQAVVQALSK LPPRQREVLV LRYYGGLSEA EISEAAGISR
GTVKSTASRA LEALQRAMNN ERRSASR
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