| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_38090 |
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| Symbol | |
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| ID | 8389130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 4129612 |
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| End bp | 4130196 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977820 |
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| Product | haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED |
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| Protein accession | YP_003135580 |
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| Protein GI | 257057748 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.516929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGG TGGTTTTCGA CTACGGCGAA GTGATCTGCA CCCGCACAGA GGCTCTGCCG
GAGCTGGCGG CTCGACTCGG CGTGCCCCCG ACCGACTTCG AATCCGCCTA CTGGGAACAC
CGGGACGCCT ACGACCGCGG CATCTCCGAT GCGACCTACT GGAAGGCCGT GGCGGACACC
CTCGGTGTCG ACATCGACGC CGACACGGTG GCGGAGCTCA CCCGCATCGA CGTCACGGGC
TGGGCGCGGC TCCACCCGGA CTCCGCCGCC CTGCTCGAGG AACTCGCCCA CGCCGGGACG
CGCCTGGCCC TGCTGTCCAA CGCGCCCGCG TCCTTCGCCC GTTTCGCCGA GCAACAGCCG
TGGGCACAGC ACTTCCACAC CCGGGTGTTC TCCGCCGACG TGGGGTGCGC CAAACCGGAC
GCGAAGATCT ACGAACTGTT GGTGTCACGC CTGGACGCCC GGCCACAGGA CTGTGTGTTC
TTCGACGACC GGTCCAGCAA CATCGAAGGC GCCCGTGCCG TGGGACTGCG CGCCTACCTC
TGGCAGGGGG CCGACCACGC ACGACAGGTG CTGACCGAAC GCTGA
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| Protein sequence | MTWVVFDYGE VICTRTEALP ELAARLGVPP TDFESAYWEH RDAYDRGISD ATYWKAVADT
LGVDIDADTV AELTRIDVTG WARLHPDSAA LLEELAHAGT RLALLSNAPA SFARFAEQQP
WAQHFHTRVF SADVGCAKPD AKIYELLVSR LDARPQDCVF FDDRSSNIEG ARAVGLRAYL
WQGADHARQV LTER
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