Gene Svir_37030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_37030 
Symbol 
ID8389024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp4025744 
End bp4026175 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID644977715 
Productpredicted redox protein, regulator of disulfide bond formation 
Protein accessionYP_003135479 
Protein GI257057647 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03562] peroxiredoxin, OsmC subfamily 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0241406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACAC GCGATGCGAC CACTCACTGG ACCGGTGGAC TGAACTCCGG CACGGGCACG 
TTGACACTCG ACTCGTCCAA CTCGGCACGG TTCACGGTCT CCTTCCCCCG TCGAATCGGC
GAGCCCGAAG GGACCACCAG TCCCGAGGAG CTGATCGCCG CGGCCCAGGC GTCCTGCCTG
GCGATGAATC TCGCGGGCAC TTTGGAGAAG GAGGGACTGA CCGCCAACTC CATCGACGCG
AACGCCTCGG TGACCGTCGA GCCCAGCAAC GGTGGACTGA GCATCAACAA CGTCGACGTC
ACCCTGCGCG CCTCGGTGGA CGGCATCGAC GAGGAGCGGT TCAGCACGAT CGCCCAGAAG
GCCAAGGACA CGTGCCCGGT GAGTCGTGCG CTCGCCGGCA CCACGATCAC CCTCCACGCG
TCCTTGGCCT GA
 
Protein sequence
MATRDATTHW TGGLNSGTGT LTLDSSNSAR FTVSFPRRIG EPEGTTSPEE LIAAAQASCL 
AMNLAGTLEK EGLTANSIDA NASVTVEPSN GGLSINNVDV TLRASVDGID EERFSTIAQK
AKDTCPVSRA LAGTTITLHA SLA