Gene Svir_36560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36560 
Symbol 
ID8388977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3977430 
End bp3977786 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content65% 
IMG OID644977669 
Productconserved hypothetical protein TIGR00103 
Protein accessionYP_003135435 
Protein GI257057603 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.29616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAAC CCGGCGGCGG AATGCCCGAT ATGCAGCAAA TCCTGCAGCA GGCCCAGAAG 
ATGCAGGAAC AGCTGGTCAC GGCGCAGCAG GAGTTGGCGA ATGCCGAGGT GACCGGCACC
TCCGGCGGTG GTCTGGTGAC CGCCACCGTC AGCGGAAGCC TGGAGCTCAA GTCGCTGTCG
ATCGATCCGA AGGTGGTTGA TCCGGAGGAC ACCGAGACGC TGTCCGACCT CGTCGTGGCG
GCGGTGCGCG ACGCGATGAA CAACGCACAG AAGCTCACCG AGGAGAAGTT GGGGCCGCTC
GCCGGGAGCC TCGGGGGCGG CATGCCCGAC CTCGGTGGAT TCGGACTTCC TGGATAA
 
Protein sequence
MVQPGGGMPD MQQILQQAQK MQEQLVTAQQ ELANAEVTGT SGGGLVTATV SGSLELKSLS 
IDPKVVDPED TETLSDLVVA AVRDAMNNAQ KLTEEKLGPL AGSLGGGMPD LGGFGLPG