Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_36520 |
Symbol | |
ID | 8388973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3973154 |
End bp | 3974179 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977665 |
Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
Protein accession | YP_003135431 |
Protein GI | 257057599 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.445478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCCGTT ACGCGTTTCG TCGAGTACTG CAACTCGTAC TCGTTCTGTT CGTTCTCTCG GTGCTGCTCT TCGCCTGGCT GCGGGCGCTT CCGGGAGGGC CGGTCTCGGC CCTCCTCGGC GACCGCGGCA CGGCGGAGAG CCGCGCTCAA TTGCGTGAGG AACTCGGGCT CGACGAGCCG ATCTTCGTCC AGTACTTCTC CTTCCTCGGC CGGGCGTTGA CCGGTAACTT CGGCAACTCC ATCGGGGTCG CCCCGGGCAT GCCCGCCCTG GAGGTGTTCT CGGAGCGGTT CCCGGCCACG ATCGAACTCA GCTTCATGGC CATCGTCCTC GCGCTGATCA CGGCGATCCC CCTCGGCTAC CTGGCCGCCC GCCGTCGCGG CGGCTGGCTG GACAACGCGG GCATCCTCAG CTCGCTGGTG GGGATCTCCG TGCCGATCTT CTTCTTCGCG TTCCTGCTGA AGTGGATCTT CGCGATCGAG CTCGGCTGGC TGCCCACGGG CGGTAGGCAG ACCGTCGGCA TCGACGCCAC CCGGGTCACC GGGTTCTTCG TGCTCGACGG CATCCTCACC CAGGAATGGG ACGCCGCCTG GGACGCGCTG GTGCATCTGC TCCTGCCCTC GATCGCACTG GCATCGATCC CGTTCGCGGT CATCTTCCGC ATCACGCGGG CTTCGGTGCT GGACGTGTTG GACGAGGACT ACGTGCGCAC GGCGCGCTCC AAGGGGCTGG CCAAGCGCGT GATCCGCGAC CGGCACATCC TGCGCAACTC GTTGCTGCCC GTGGTGACGA CCGTGGGGTT GCAAACGGGT TCGCTGCTGT CGGGAGCGGT GCTCACCGAA ACCGTGTTCG CCTGGCACGG CATCGGAGAA GCGCTCGCAC TCGGCTTCGA ACGCAAGGAC TTCCCCGTGC TTCAAGTGGT CATCATCGCC GGGGCGGCGT CGTACGTACT GATCAACCTC TTGGTCGACC TGTCGTACGC GCTGATCGAC CCGCGCATCC GTACGGCGCA GAAAGTGGGG TCGTAA
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Protein sequence | MLRYAFRRVL QLVLVLFVLS VLLFAWLRAL PGGPVSALLG DRGTAESRAQ LREELGLDEP IFVQYFSFLG RALTGNFGNS IGVAPGMPAL EVFSERFPAT IELSFMAIVL ALITAIPLGY LAARRRGGWL DNAGILSSLV GISVPIFFFA FLLKWIFAIE LGWLPTGGRQ TVGIDATRVT GFFVLDGILT QEWDAAWDAL VHLLLPSIAL ASIPFAVIFR ITRASVLDVL DEDYVRTARS KGLAKRVIRD RHILRNSLLP VVTTVGLQTG SLLSGAVLTE TVFAWHGIGE ALALGFERKD FPVLQVVIIA GAASYVLINL LVDLSYALID PRIRTAQKVG S
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