Gene Svir_36280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_36280 
Symbol 
ID8388949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3949982 
End bp3950713 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID644977642 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003135408 
Protein GI257057576 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.839835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGGAGG GTCACGCGGG TTTCGTGCTG CCGCTGCTGC GGCCGGGGAT GCGGGTGCTC 
CACGTCGGTT GCGTCCGGCA GGAGGATCGC GGGGGAGCAC GGAGTACTGC GAGCCTGGGT
ACGGCGGTTC ATCCGATACA CGTCATCGGG CTCGACACCG ATGTCGACGA GCTGCAGTAC
GTGCGGCGGG CGAGTGAACT GGCGGCAGTG TCCACCGTCG ACTTCGTCGC CTGTGACGTG
CGCTCCTTGG CGGTGAGTTC GGGTAGTATC GACCTGGTCT ACGCCCATGG GCTTTTGGAA
CGCGAGCCCG ACCCGGTGTT GGTGCTCGCC GAGTTCGCCA GGGTGCTGAA ACCGGACGGG
GTGCTCGCCC TGTCGACACC GGACTGGAGC CGCACCCGGG TCAAACCCAA GACCGCCAAC
GTCGACGCGG CCTTGCGCGG CTGGACTCTA CTGCGTCACC GCCAGGGCGG TGACCCGTTC
GCGGGCAGAC ACGTGGACGA CTGGGTGCGT CGCGCGGGAT TCCGCGACGT GCGGTCGAAG
GCGCGCTACT ACACGGGCGA CGACTACCGG GGATTGGCGC GCACCATCGA AACCGAGCTG
GCCGAGGCGT TGGACGCGAG CGACGACATG GACCCGCAGC TGGCGAGCGC GGCCCGTTCC
GCGTGGATGT GGGTGCGGGG AGGTCAGGGG GAGGTCAGCG AATGCTGGGT GGAGACGGTG
GCCGTGCGTT GA
 
Protein sequence
MWEGHAGFVL PLLRPGMRVL HVGCVRQEDR GGARSTASLG TAVHPIHVIG LDTDVDELQY 
VRRASELAAV STVDFVACDV RSLAVSSGSI DLVYAHGLLE REPDPVLVLA EFARVLKPDG
VLALSTPDWS RTRVKPKTAN VDAALRGWTL LRHRQGGDPF AGRHVDDWVR RAGFRDVRSK
ARYYTGDDYR GLARTIETEL AEALDASDDM DPQLASAARS AWMWVRGGQG EVSECWVETV
AVR