| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_35450 |
|---|
| Symbol | |
|---|
| ID | 8388866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3864898 |
|---|
| End bp | 3865650 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644977562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003135330 |
|---|
| Protein GI | 257057498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.545265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGTGC CCGTACTCGA ACGCCCGGTG GACATCCCGC GGGTGGTCCT GCTGCACACC
TGGACCGTCG AACGACTCGG CGACCCGCAC CCCGTGCTCG GGTCGTTGGG TCTCTACGTG
CCCCAGGACA ACAGGGCCGA ACTCACCCGA CGCTGCCTGC GCCTGCTCGC CGAACTGGGG
CTGGCCACCG ACGAAGTCCT CGCCCCGCGG TTCCGCGACA CCCTGCTCAC CCTGGCCGAA
CCCGGACGGG AGCTGTACTG CTGGAGCTCC TTCGCCGACC CGGCACACGA CAGGGCGTGC
CTGGTCGCGG AACGCGAGGG CGAGGCGGTG GCCCTCTCGG TGCACGAGGA CACCGTGACG
CTGCGGCCGA TCGACCCACG CCACCTCGTG GAGGAATTCG TCACCACCCT GCCGCAGACC
CCGCCCGCCC CCGTCCGTCC CCTGACGGTG CCGCGAGTCG ACGTCGAGAA CCCGGACGAC
CACGACATGG GGCACACCGA TCCGCTCGCC GAACCCGGTG CCGCCGACGA ACTGCGGACC
CAACTGAGCG CACCGCGTGA CGCCGCGCAC CAGTTGTACG GCGCGGTCAC CTACGACGGC
GCCCGTCGCC GGAGCAAACC GCTGACGGCG ATCGACGTGT CCGGACTCGG CCGGATACTG
GTGTTCCTCG ACGCCGAGGA CCGGGTGCAC CGACTGCCCG GCACGCCGGG TGCGCTGGTG
GACACGCTGC GGGCCACCTG GAAGGGACTG TGA
|
|---|
| Protein sequence | MDVPVLERPV DIPRVVLLHT WTVERLGDPH PVLGSLGLYV PQDNRAELTR RCLRLLAELG
LATDEVLAPR FRDTLLTLAE PGRELYCWSS FADPAHDRAC LVAEREGEAV ALSVHEDTVT
LRPIDPRHLV EEFVTTLPQT PPAPVRPLTV PRVDVENPDD HDMGHTDPLA EPGAADELRT
QLSAPRDAAH QLYGAVTYDG ARRRSKPLTA IDVSGLGRIL VFLDAEDRVH RLPGTPGALV
DTLRATWKGL
|
|---|
| |