Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_35130 |
Symbol | cysS |
ID | 8388835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3815908 |
End bp | 3817287 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977533 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_003135301 |
Protein GI | 257057469 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.782995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCTTC AACTGTTTGA CACCGCAGCC AGGCAAGTGC GCGAGTTCCG TCCCGCGCGC AGTGGGACGG CGTCCATGTA CATCTGTGGG GCCACGGTGC AGGGCGTACC GCACATCGGG CACGTACGCG GTGCGCTCAA CTACGACGTG CTACGCCGCT GGCTGGTCCA TTCGGGACTC GACGTGCTCA TGGTGCGCAA CGTCACCGAC ATCGACGACA AGATCCTCAC CAAGGCCGCC GAGGCCGGTC GGCCGTGGTG GGAGTGGGCG GCGACCCACG AGCGCGCGTT CGAGGACGCC TATGCCGCGC TGGGCTGCCT GCCACCGTCG GTGACCCCAC GTGCCACCGG GCACATCACG CAGATGATCG AGTTGATCCA ACGACTGATC GACTCCGGTC ACGCCTACGC CGCTGAGGGC AACGTCTATT TCTCCGTGTC GACGTTCGAC AGCTACGGAC AGCTGTCGGG ACAGCGCTTG GACGAGGTGC AGCAGGGCGA GACCCAGTCC GAGGGGAAAC GCGACCCCCG CGACTTCACG CTGTGGAAGG CGAGCAAGCC GGGGGAACCG TCGTGGCCCA CGCCGTGGGG ACGTGGCAGG CCCGGCTGGC ACCTGGAATG CTCGGCCATG GCCACCACGT ATCTCGGCTC GGAGTTCGAC ATCCACGGCG GCGGCGTGGA TCTGGTGTTC CCACACCACG AGAACGAACG CGCCCAGTCG ATGGCCGCGG GTGACGGTTT CGCCCGGTAC TGGCTTCACA ACGCCTGGGT GACCCTGGCG GGCGAGAAGA TGTCCAAATC GCTCGGCAAC GTCGTGGCTA TCCCCGAGAT GTTGCGCCGC TATCGTGCCG TGGAGCTGCG GGCGTACCTC ATCCAGCCGC ACTACCGCTC CACGATCGAG TACTCGGACG CCGCGTTGTC GGAGTCGGCC CAGGGCTATC GGCGGATAGA ACAGTTCTTG AGGCGCGTGC AGAGCAGCAC GGGCGAGGTT CAGGTGGGTC GCGTCCCGGC CGAGTTCGCC GCCGCGCTCG ATGACGACCT CGGCACCCCG CAGGCGTTCG CCGTGCTGCA CAACACCGTG CGGGACGGTA ACGCCGCACT CGACTCGGCC AAGGAGACCG AGGCACGCCA GCTCGCCGAG ACCGTGCGCG CGATGGTGGA CGTGCTGGGG ATCGACCCGT TGTCGGAGCA GTGGGCCGAA CAGGGGGGTG CCGAGGCCGA GGTACTCGCG CGGCTGGTGG ACGCCATGCT CGAGGAGCGG CAACAGGCCC GCGCGAACCG TGACTTCGCC ACGGCCGACG CCATCCGCGA CCGGCTGATC GAAGCCGGCA TCGCCGTGGA AGACACCCCC AATGGTCCTC AGTGGACAGT GAGAGACTGA
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Protein sequence | MALQLFDTAA RQVREFRPAR SGTASMYICG ATVQGVPHIG HVRGALNYDV LRRWLVHSGL DVLMVRNVTD IDDKILTKAA EAGRPWWEWA ATHERAFEDA YAALGCLPPS VTPRATGHIT QMIELIQRLI DSGHAYAAEG NVYFSVSTFD SYGQLSGQRL DEVQQGETQS EGKRDPRDFT LWKASKPGEP SWPTPWGRGR PGWHLECSAM ATTYLGSEFD IHGGGVDLVF PHHENERAQS MAAGDGFARY WLHNAWVTLA GEKMSKSLGN VVAIPEMLRR YRAVELRAYL IQPHYRSTIE YSDAALSESA QGYRRIEQFL RRVQSSTGEV QVGRVPAEFA AALDDDLGTP QAFAVLHNTV RDGNAALDSA KETEARQLAE TVRAMVDVLG IDPLSEQWAE QGGAEAEVLA RLVDAMLEER QQARANRDFA TADAIRDRLI EAGIAVEDTP NGPQWTVRD
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