Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_34670 |
Symbol | thiE |
ID | 8388789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3771035 |
End bp | 3771712 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644977487 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_003135256 |
Protein GI | 257057424 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0588198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGCC TCGACGGTGA CCAGATCAGA AAACGTCTCG CGGACGCGAA GCTCTACCTC TGCACGGATG CGCGGTTGCC GCACGGCGAC CTCGCCGAGT TCGTCGATGC CGCGCTCGCG GGAGGCGTGG ACATCGTGCA GCTGCGGGAC AAGACCGGCG GAGCGCCGTT GGAGGCGGCC CAGGAGATCG AGGCTTTGGA GATCCTCGCG CAGGCGTGCG CTCGGCACGG TGCGCTACTG GCGGTCAACG ACCGCGCCGA TGTCGCACTG GCCGTGGACG CGGACGTCCT GCACCTCGGC CAGAACGACC TCCCCGTGTC GGTCGCCCGC CGCATCATCG GGGAGCGGCC GGTGATCGGT CGTTCGACCC ATTCGTTGGA GCAGGCGCGC GCGGCCTCCG TCGAGGAGGG GGTCGACTAC TTCTGCGTCG GACCGTGCTG GCCCACCCCC ACCAAACCCG GTCGCCCCGC CCCCGGCCTG GACCTCGTAC GGGCCGTGGC AGACGGGATC GAGACCTCTC GGCCGTGGTT CGCGATCGGC GGGATAGACC GGCAACGGCT CGACAAGGTG GTGGAGGCGG GCGCACACCG CGTCGTCGTC GTACGGGCCA TCACCGAGGC CGACGATCCG GCGGAGGCGG CACGCGCCCT GCGTGACGGA CTCGTCGCGG TGGGCTGA
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Protein sequence | MPGLDGDQIR KRLADAKLYL CTDARLPHGD LAEFVDAALA GGVDIVQLRD KTGGAPLEAA QEIEALEILA QACARHGALL AVNDRADVAL AVDADVLHLG QNDLPVSVAR RIIGERPVIG RSTHSLEQAR AASVEEGVDY FCVGPCWPTP TKPGRPAPGL DLVRAVADGI ETSRPWFAIG GIDRQRLDKV VEAGAHRVVV VRAITEADDP AEAARALRDG LVAVG
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